Gene Rsph17025_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1717 
Symbol 
ID5083956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1766211 
End bp1766816 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID640483276 
ProductABC-type uncharacterized transport system auxiliary component-like protein 
Protein accessionYP_001167915 
Protein GI146277756 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.230459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCC TGACCCGTTC CACACTCCTC GTTGCGACCC TGATGCTGGC GGGCTGCGGT 
GCCGTCACGT CGCTCTCGCG CGCCTCCGAG CAGCTCGACA CCTACACCCT GTCGCCCCTG
CCCGGACCGG GAGGCGGCGG CGCGCGTCAT GTCGTGGTCG AGCCGGTGAC GGCCGGCGGG
GCCCTGTCCA CGGACCGGAT CCTGATCAAG CCCTCGCGCG TGCAGGCGCA GTATCTGCCC
GATGCGCGCT GGTCGGACCC GGCTCCGGCG CTGGTGCAGA CGCTGCTGGT GGGCTCTCTC
CAGAATGCCG GCGGCTTCCG GCTTGTGGCG CGCGAGGCCG CGGGACTGAT CCCCGACTAC
ACGCTGATGA CCGAACTGCG CGACTTCCAG GCCGAGGCCC CTCCCGGCGC GACTCCGGTT
GTCCGGGTCG CCATGGTCCT GACGCTGATC CGCGAGTCCG ACCGGAGCGT GGCCTCCAGC
CGGCGCGTCG AGGCCGTGGC GCCAGCCGCC TCCGACACGA CGGGGGATGT CGTCGTGGCC
TTCGAGGCGG CCGTGACCCA GGCGCTGGGG CAGGCGATCG GCTGGGCGCG GGCGCAGGCG
CGCTGA
 
Protein sequence
MRALTRSTLL VATLMLAGCG AVTSLSRASE QLDTYTLSPL PGPGGGGARH VVVEPVTAGG 
ALSTDRILIK PSRVQAQYLP DARWSDPAPA LVQTLLVGSL QNAGGFRLVA REAAGLIPDY
TLMTELRDFQ AEAPPGATPV VRVAMVLTLI RESDRSVASS RRVEAVAPAA SDTTGDVVVA
FEAAVTQALG QAIGWARAQA R