Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1717 |
Symbol | |
ID | 5083956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1766211 |
End bp | 1766816 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640483276 |
Product | ABC-type uncharacterized transport system auxiliary component-like protein |
Protein accession | YP_001167915 |
Protein GI | 146277756 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.230459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCC TGACCCGTTC CACACTCCTC GTTGCGACCC TGATGCTGGC GGGCTGCGGT GCCGTCACGT CGCTCTCGCG CGCCTCCGAG CAGCTCGACA CCTACACCCT GTCGCCCCTG CCCGGACCGG GAGGCGGCGG CGCGCGTCAT GTCGTGGTCG AGCCGGTGAC GGCCGGCGGG GCCCTGTCCA CGGACCGGAT CCTGATCAAG CCCTCGCGCG TGCAGGCGCA GTATCTGCCC GATGCGCGCT GGTCGGACCC GGCTCCGGCG CTGGTGCAGA CGCTGCTGGT GGGCTCTCTC CAGAATGCCG GCGGCTTCCG GCTTGTGGCG CGCGAGGCCG CGGGACTGAT CCCCGACTAC ACGCTGATGA CCGAACTGCG CGACTTCCAG GCCGAGGCCC CTCCCGGCGC GACTCCGGTT GTCCGGGTCG CCATGGTCCT GACGCTGATC CGCGAGTCCG ACCGGAGCGT GGCCTCCAGC CGGCGCGTCG AGGCCGTGGC GCCAGCCGCC TCCGACACGA CGGGGGATGT CGTCGTGGCC TTCGAGGCGG CCGTGACCCA GGCGCTGGGG CAGGCGATCG GCTGGGCGCG GGCGCAGGCG CGCTGA
|
Protein sequence | MRALTRSTLL VATLMLAGCG AVTSLSRASE QLDTYTLSPL PGPGGGGARH VVVEPVTAGG ALSTDRILIK PSRVQAQYLP DARWSDPAPA LVQTLLVGSL QNAGGFRLVA REAAGLIPDY TLMTELRDFQ AEAPPGATPV VRVAMVLTLI RESDRSVASS RRVEAVAPAA SDTTGDVVVA FEAAVTQALG QAIGWARAQA R
|
| |