Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1653 |
Symbol | |
ID | 5082731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1694308 |
End bp | 1695108 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483211 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001167851 |
Protein GI | 146277692 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.314291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGCC TGCCCGCCCT CGACCTGCCG GGGCTGCTGG GAAGCCTCAC GAGCCTCTTC TTCGCCACCC TCAGGATCGG CGCCTTCCTT CTGGCCTCGC CCGCCTTCGG GGGCCGCTTC GTGCCGCTTC CCGTGCGGAT CATGGCGACC GTCGTGCTGA CCTTGCCCGT GCTCGGGCGC GCCGATCTGC CGGGGCCCGA GGCGCTGGCC AGCCTCTCGG CCGTGCCGAT GATGATGCAG GAGATCGCGA TCGGCCTTTC GGCGGGGCTC GTGCTGACGG TGCTCTTCTC GGCCGCGGCT CTGGCCGGGG ACCGGATCGC CGCGACGGCG GGTCTTGGAT TTGCGGCCCA GATCGACCCG TCGGCGGGCG GGCAGACGCC GGTGGTGGCG CAGATCTTCG GGCTGGCCCT CACCACGGTG TTCCTCGCCC TCGACGGGCA CCTGTCGGCC TTCGAGATCC TGCTGCGCAG CTACGAGAGC CTGCCGCCCG GCGCCCCCTT CGCCCCCGGA CCCTTCCTCG AGGCCGGGAT CGGCGCGGGC GGGCGGATGT TCCTCGTCGG CCTGCAGATC ATGATGCCGG TGGTGGCGGC GCTCGTCCTC ATCAACATCA CCATCGGCGT CATCACCCGT TCGGCGCCCC AGCTCAACGT CTTTTCCTTC GGTTTTCCGG TGACGATGTC GGCCACGCTG ATCCTGCTGT TCCTCACCGT GCCCGGCACG ATGGGCGCCT TTTCCTCGCT GGTGGCCGAC AGCCTCGCCG CGCTCGCGCA ACTGCTCGAG GTGACCGATG GCCGAGGGTG A
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Protein sequence | MESLPALDLP GLLGSLTSLF FATLRIGAFL LASPAFGGRF VPLPVRIMAT VVLTLPVLGR ADLPGPEALA SLSAVPMMMQ EIAIGLSAGL VLTVLFSAAA LAGDRIAATA GLGFAAQIDP SAGGQTPVVA QIFGLALTTV FLALDGHLSA FEILLRSYES LPPGAPFAPG PFLEAGIGAG GRMFLVGLQI MMPVVAALVL INITIGVITR SAPQLNVFSF GFPVTMSATL ILLFLTVPGT MGAFSSLVAD SLAALAQLLE VTDGRG
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