Gene Rsph17025_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1195 
Symbol 
ID5084479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1237067 
End bp1237846 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID640482753 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001167401 
Protein GI146277242 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.206462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.651553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CCACCTACAA CATCAACGGC ATCAAGGCCC GCATCGAGGC GGTTCTGGCC 
TGGCTCGAGG CGGCCAGCCC GGACGTGGTG CTGCTGCAGG AGATCAAGTC GGTCGATGAG
ACCTTTCCAC GCGCGGTCTT CGAGGACCGA GGCTGGCATC TCGAGACGCA CGGGCAGAAG
GGCTTCAACG GGGTGGCGAT CCTCTCGCGC CTGCCGCTCG AGGATGTGGT GCGCGGCCTG
CCGGGCGACG CCGAGGATGT GCAGGCCCGC TGGATCGAGG CCACCGTCGT GGGCCAGCGC
GCGGTGCGGG TCTGCGGGCT CTACCTGCCG AACGGCAACC CGGCGCCGGG GCCGAAATAC
GACTACAAGC TGGCCTGGAT AGCCCGGATG AAGCAGCGCG CGGCCGAGCT GCTCGAGACC
GAGGACCCCG TGGTGCTGGC GGGCGACTAC AACGTGATCC CCCAGGCCGA GGATGCGGCG
CGCCCCGAGG CCTGGGTCAC CGATGCGCTC TTCCTGCCGG AAAGCCGGGC CGCCTTCCGG
CGGATCCTGA ACCTCGGCTA CACCGAGGCC TTCCGCGCCC GCAGCTTTGG CCCGGGGCAC
TATTCCTTCT GGGACTATCA GGCCGGCGCC TGGGAGAAGA ACAACGGCAT CCGCATCGAC
CATCTGCTGC TCTCGCCGCA GGCGGCAGAC CTGATGACCG ATGTCCGCAT CGACCGCGAG
GTGCGGGCGG GCGAGAAGCC ATCGGATCAT GTGCCGGTCT GGGTCGAACT GGCCGCCTGA
 
Protein sequence
MKIATYNING IKARIEAVLA WLEAASPDVV LLQEIKSVDE TFPRAVFEDR GWHLETHGQK 
GFNGVAILSR LPLEDVVRGL PGDAEDVQAR WIEATVVGQR AVRVCGLYLP NGNPAPGPKY
DYKLAWIARM KQRAAELLET EDPVVLAGDY NVIPQAEDAA RPEAWVTDAL FLPESRAAFR
RILNLGYTEA FRARSFGPGH YSFWDYQAGA WEKNNGIRID HLLLSPQAAD LMTDVRIDRE
VRAGEKPSDH VPVWVELAA