Gene Rsph17025_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0906 
Symbol 
ID5083384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp926065 
End bp926700 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID640482464 
Productputative transcriptional regulator 
Protein accessionYP_001167114 
Protein GI146276955 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.195503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0577759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC GGCCGGAAAA GAGCCTGTTC GACGCGCCGG TGATGGCCGA GCAGGAACGG 
ATGGTCGAGG CGATCCTGTT CGCCTCCGCC GAGCCGGTGA CGGTGGCCGA GCTGGCGGCC
CGGATGCCGC ATGGCTGCGA CCCGGCCGAG GCGCTGATGA ATCTGCGCAG CCGCTACGAG
GGGCGCGGCG TGCATCTGGT GCGGGTGGGC GACGCCTGGG CCTTCCGCAC GGCCGCCGAT
CTGGGCTTCC TGATGCGCAA GGAGACGGTC GAGCAGAAGA AGCTCTCGCG CGCCGCGATC
GAGACGCTGG CCATCGTGGC CTATCACCAG CCCGTCACCC GCGCCGAGAT CGAGGAGATC
CGCGGCGTGG CCGTCAGTCG CGGCACCATC GACCAGCTGA TCGAGCTGGA ATGGATCCGG
TTCGGCCGCA GGCGCATGAC GCCCGGCCGC CCGGTGACCT TCGTCGTGAC CGAGACCTTC
CTCGATCACT TCGGGCTCGA GTCGGCGCGC GATCTGCCGG GGATCAAGGA ACTGCGCGCG
GCGGGCCTGC TCGACAACCG TCCGCCGCCG GGCAGCGCGC GGCAGCCGGA CGAGGACGAG
CCGGTGACGG GACAAAGCGA ACTCTTCGAG GACTGA
 
Protein sequence
MNERPEKSLF DAPVMAEQER MVEAILFASA EPVTVAELAA RMPHGCDPAE ALMNLRSRYE 
GRGVHLVRVG DAWAFRTAAD LGFLMRKETV EQKKLSRAAI ETLAIVAYHQ PVTRAEIEEI
RGVAVSRGTI DQLIELEWIR FGRRRMTPGR PVTFVVTETF LDHFGLESAR DLPGIKELRA
AGLLDNRPPP GSARQPDEDE PVTGQSELFE D