Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0906 |
Symbol | |
ID | 5083384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 926065 |
End bp | 926700 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482464 |
Product | putative transcriptional regulator |
Protein accession | YP_001167114 |
Protein GI | 146276955 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.195503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0577759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAC GGCCGGAAAA GAGCCTGTTC GACGCGCCGG TGATGGCCGA GCAGGAACGG ATGGTCGAGG CGATCCTGTT CGCCTCCGCC GAGCCGGTGA CGGTGGCCGA GCTGGCGGCC CGGATGCCGC ATGGCTGCGA CCCGGCCGAG GCGCTGATGA ATCTGCGCAG CCGCTACGAG GGGCGCGGCG TGCATCTGGT GCGGGTGGGC GACGCCTGGG CCTTCCGCAC GGCCGCCGAT CTGGGCTTCC TGATGCGCAA GGAGACGGTC GAGCAGAAGA AGCTCTCGCG CGCCGCGATC GAGACGCTGG CCATCGTGGC CTATCACCAG CCCGTCACCC GCGCCGAGAT CGAGGAGATC CGCGGCGTGG CCGTCAGTCG CGGCACCATC GACCAGCTGA TCGAGCTGGA ATGGATCCGG TTCGGCCGCA GGCGCATGAC GCCCGGCCGC CCGGTGACCT TCGTCGTGAC CGAGACCTTC CTCGATCACT TCGGGCTCGA GTCGGCGCGC GATCTGCCGG GGATCAAGGA ACTGCGCGCG GCGGGCCTGC TCGACAACCG TCCGCCGCCG GGCAGCGCGC GGCAGCCGGA CGAGGACGAG CCGGTGACGG GACAAAGCGA ACTCTTCGAG GACTGA
|
Protein sequence | MNERPEKSLF DAPVMAEQER MVEAILFASA EPVTVAELAA RMPHGCDPAE ALMNLRSRYE GRGVHLVRVG DAWAFRTAAD LGFLMRKETV EQKKLSRAAI ETLAIVAYHQ PVTRAEIEEI RGVAVSRGTI DQLIELEWIR FGRRRMTPGR PVTFVVTETF LDHFGLESAR DLPGIKELRA AGLLDNRPPP GSARQPDEDE PVTGQSELFE D
|
| |