| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0703 |
|---|
| Symbol | |
|---|
| ID | 5082973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 712175 |
|---|
| End bp | 713815 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640482261 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001166914 |
|---|
| Protein GI | 146276755 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT CGCTTGACAT CCGTGACATG CTGATCATCG ATCGGCTCTC GCTGGCCTTC
CAGCCGGGGC TGAACGTGCT CACCGGCGAG ACGGGGGCGG GCAAGTCGAT CCTGCTCGAC
TCGCTGGGCT TCGTGCTGGG TTGGCGCGGC CGGGCCGAGC TTGTGCGCGC GGGCGCCGAC
AAGGGCGAGG TGACGGCCGT CTTCGACCTG CCGCCCGGCC ATGCGGCCCG CGCGGTGCTG
GACGAGGCCG GGATCGAGGC CGAGGACGAG CTGATCCTCC GCCGGGTGAA TTTCGCCGAT
GGGCGCAAGA CCGCCTGGGT CAACGACCGG CGCGTGTCGG GCGAGGTGCT GCGGGGCCTC
TCGGACCGGC TGGTGGAACT GCACGGCCAG CACGACGACC GCGGCCTGCT GAACCCGCGC
GGCCACCGGC AGATGCTCGA CACGTTCGCG GGGCTCGACC TCTCGCCTTG CCGCCGCGCC
TGGACCGCCC TCGGCGCCGC CCGGCGGTCC CTGCTCGCCG CCGAGGAGGC GTTGGCCGCG
GTCCGCGCCG AAGAGGATTT CCTGCGCCAT GCGGTGACCG AGCTGGACAA GCTCGATCCC
CAGCCCGGCG AGGAGGCGCT GCTCGACACC CGCCGCCGCG AGATGCAGGG CGCCGAGAAG
ATCCGCGACG ACATCGCCCG CGCCTACCGG GCCCTGTCCG CCGAAGGGGC CGAGAGCCTT
CTGGTCGATG CGCTGCGCTG GCTCGAGGCG GCCTCGGACC GCGCCGGCAA CCGGCTCGAG
GCGCCGCTGG CCTCGCTGTC GCGGGCGCTG ATCGAGCTGG GCGAGGCGCA GGAGGGTGTG
GAAGCCTGCC TCGCCGACCT TGACTTCGAT CCGCGCGACC TTGAGGCGCT GGAAGAGCGG
CTGTTTGCGA TCCGGGCGCT GGCGCGCAAG CATTCCGTCC TGCCGGACGA ACTGGGCAAC
TTTGCCGAAG AGTTGCGCAC GCGGCTTGAG GCGCTCGACG GGGGCACGAA GCGGATCGAC
GGTCTGCGCC ATGCGGTGCA GGAGGCCGAG GCCGCGTGGG AGGCCGAGGC CGCCGCCCTG
TCCGCCGCCC GCCGGGCGGC CGCCGGGCGG CTCGATGCCG CGATGGCGGC CGAGCTTGCG
CCGCTCAAGA TGGAGCGGGC GGTGTTCGCG ACGCAGGTGA CCGAGGCCGA CCCCGGCCCC
GAGGGCCGCG ACGCGGTGGC CTTCACCGTC GCCACCAACC CCGGCTCACC CGCCGGCGCC
CTGAACCGCA TCGCCTCGGG CGGCGAGCTG TCGCGCTTCC TGCTCGCGCT CAAGGTCTGC
CTGACGGGCG ACAGCCCCGG CCTCACGCTG ATCTTCGACG AGATCGACCG CGGGGTAGGG
GGCGCCACCG CCGACGCGGT CGGGCGCCGG CTGAAGGCGC TGGCGCAGGG GGCGCAGGTG
CTGGTGGTGA CGCACTCGCC GCAGGTGGCC GCGCTTGGCG CGCATCACTG GCGCGTCGAG
AAGCGCGTGG CCCAGGGGAT GACGACCTCG ACGGTGACGC CGCTCGTCGC GGAGGGGCGG
ATCGAGGAGA TCGCCCGGAT GCTCGCCGGC GACACGATCA CCGATGCCGC GCGCGAGGCG
GCCCGGGCGC TGCTCGACTG A
|
|---|
| Protein sequence | MLRSLDIRDM LIIDRLSLAF QPGLNVLTGE TGAGKSILLD SLGFVLGWRG RAELVRAGAD
KGEVTAVFDL PPGHAARAVL DEAGIEAEDE LILRRVNFAD GRKTAWVNDR RVSGEVLRGL
SDRLVELHGQ HDDRGLLNPR GHRQMLDTFA GLDLSPCRRA WTALGAARRS LLAAEEALAA
VRAEEDFLRH AVTELDKLDP QPGEEALLDT RRREMQGAEK IRDDIARAYR ALSAEGAESL
LVDALRWLEA ASDRAGNRLE APLASLSRAL IELGEAQEGV EACLADLDFD PRDLEALEER
LFAIRALARK HSVLPDELGN FAEELRTRLE ALDGGTKRID GLRHAVQEAE AAWEAEAAAL
SAARRAAAGR LDAAMAAELA PLKMERAVFA TQVTEADPGP EGRDAVAFTV ATNPGSPAGA
LNRIASGGEL SRFLLALKVC LTGDSPGLTL IFDEIDRGVG GATADAVGRR LKALAQGAQV
LVVTHSPQVA ALGAHHWRVE KRVAQGMTTS TVTPLVAEGR IEEIARMLAG DTITDAAREA
ARALLD
|
|---|
| |