Gene Rsph17025_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0654 
Symbol 
ID5082998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp656783 
End bp657910 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content70% 
IMG OID640482211 
Productaminotransferase, class V 
Protein accessionYP_001166865 
Protein GI146276706 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.360401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.15732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC TGCGCCCGGA TGTCGATCCC GATGGTCTGA TGGAGTTCTC GGTCGTCTTC 
ACCGACCGTT CGCTGAACCA TATGTCGGCC CGGTTCCAGC AGGTGATGCG CGACATCTCG
GCCATGCTGC GCGAGGTCTA TGCGGCCGAG GCCGTGGCCG TCGTGCCGGG CGGCGGCACC
TTCGCGATGG AGGCGGTGGC GCGGCAGTTC GCGACCGGGG CCCATGCTCT TGTGGTGCGC
AACGGCTGGT TCTCCTATCG CTGGACGCAG ATCCTGGAGG CGGGCGGTTT TGCGGCGGAG
CAGACGGTCG TGATGGCGCG GCCCTCGGGC AACGGGGCGC GCGCGCCCTT TGCGCCGCCG
CCGATCGAGG AGGTGGTGGC GAAGATTGCC GAGGTGAAGC CCGACGTGGT CTTTGCGCCG
CATGTCGAGA CCTCCTCGGG GATCATCCTG CCCGACGATT ACATCGCGCG CATGGCCGAG
GCCGCGCATG AGGCGGGCGC GCTCCTGGTG CTCGACTGCA TCGCGAGCGG CTGCGTCTGG
GTGGACATGC AGGCCACGGG CGTGGATGTG CTGATTTCGG CGCCGCAGAA GGGCTGGTCC
TCGTCGCCGG CGGCGGGGCT GGTCATGCTC TCGGCGCGCG CGGCGGAGCG GCTCGAGGCG
ACTCAGTCGA ACAGCTTCGC GCTCGACCTG AAGAAGTGGC GCGCCATCAT GGCGGCCTAC
GAGGCGGGCG GGCACGCCTA TCACACGACG ATGCCGACGG ACGCGCTGCT GGGCTTCCGC
GAGGCGATGG CGGAGACGCG GGCCATGGGG TTCGGGGCCG CCAAGGAGGC GCAATGGCGG
CTTGGGCGGG AGGTCCGGGC GATGCTGGCC GCGAAGGGGG TTGAATCGGT GGCCGCCGAG
GGCTTCACCG CGCCCGGTGT GGTCGTCAGC TACACGGACG ATCCCGAGAT CCAGACCGGG
CGGAAGTTCC TCGCGCAGGG GATGCAGATC GCGGCGGGTG TGCCGTTGCA GGTGGGCGAG
GGGGCCGAGT TCCGCACCTT CCGGCTGGGT CTGTTCGGGC TGGACAAGCT GGCCGACGTG
GAAGGCACGG TTGCGCGGCT GAAGGCGGTG GTGGACCGGG TGATCTGA
 
Protein sequence
MPALRPDVDP DGLMEFSVVF TDRSLNHMSA RFQQVMRDIS AMLREVYAAE AVAVVPGGGT 
FAMEAVARQF ATGAHALVVR NGWFSYRWTQ ILEAGGFAAE QTVVMARPSG NGARAPFAPP
PIEEVVAKIA EVKPDVVFAP HVETSSGIIL PDDYIARMAE AAHEAGALLV LDCIASGCVW
VDMQATGVDV LISAPQKGWS SSPAAGLVML SARAAERLEA TQSNSFALDL KKWRAIMAAY
EAGGHAYHTT MPTDALLGFR EAMAETRAMG FGAAKEAQWR LGREVRAMLA AKGVESVAAE
GFTAPGVVVS YTDDPEIQTG RKFLAQGMQI AAGVPLQVGE GAEFRTFRLG LFGLDKLADV
EGTVARLKAV VDRVI