| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0644 |
|---|
| Symbol | |
|---|
| ID | 5082988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 644922 |
|---|
| End bp | 647198 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640482201 |
|---|
| Product | glycine--tRNA ligase |
|---|
| Protein accession | YP_001166855 |
|---|
| Protein GI | 146276696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.121642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.442369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TGCTGATCGA ACTCTTCTCG GAAGAGATCC CCGCGCGGAT GCAGGCCCGC
GCGCGCGAGG ACCTGAAGAA GCTCGTGACC GACGGTCTGG TCGAGGCGGG CCTGACCTAC
GCCTCGGCGG GCGCCTTCTC GACCCCCCGG CGGCTGGTGC TGTCGGTCGA GGGGCTTTCG
GCCGAAAGCC CGACGCTCCG CGAAGAGCGC AAGGGCCCCA AGGCCGACGC GCCCGCCGCC
GCCATCGAGG GCTTCCTGCG CTCGACCGGC CTCACGCGCG ACCAGCTCGA GACCCGCGAG
GACAAGAAGG GCGCCGTCCT CTTCGCCGTG GTGGAGAAGC CCGGCCGCCG CGCGCCCGAC
ATCGTGGCCG AGGTGCTCGA GCGCACGATC CGCACCTTTC CCTGGCCCAA GTCCATGCGC
TGGGGCACGG GCTCCTTGCG CTGGGTGCGG CCGCTCCATT CGATCCTCTG CCTGCTCTCG
GACGAAGCCG GATCGCAGGT CGTGCCGGTC ACGGTCGATC AGGTGACAGC CGTCAACACC
ACCGAGGGTC ACCGTTTCAT GGCGCCCGGC CGTTTTGCCG TCACGGGCTT CGACGACTAC
CGCGCCAAGC TGCAGCGCGC CTTAGTGATG CTGGATGCGG CCGAGCGCGA GCAGGCGATC
TGGCACGAGG CCACCACCCA GGCCTTCGCG CAGGGCCTCG AGGTCGTGCC CGACGCGGGG
CTTCTCGCCG AGGTCGCGGG CCTCGTCGAA TGGCCCGTGG TCCTGATGGG GCCGATCGGC
GAAGAGTTCC TCGGCCTGCC GCCCGAGGTG CTTCAGACCT CGATGCGCGA GCACCAGAAG
TTCTTCTCGG TCAGGAACCC CGCCACCGGC CGGATCGAGA AGTTCGTGAC CGTGGCCAAC
CGCGAGACCG CCGACCACGG CGCCACGATC CTGAAGGGCA ACGCCAAGGT GCTGTCCGCG
CGCCTCTCCG ACGCGAGCTT CTTCTGGGAG AACGATCGGC GCACGGTGCA GACGGTGGGC
CTCGAGGGCA TGGCCGCGGG CCTTGCCCAT GTCACCTTCC ACAACAAGCT GGGCTCTCAG
GCCGACCGCA TCGCCCGGAT CGAGGCGCTC GCGCGCGAGA TCGCGCCGCT GGTGGGCGCC
TCGCCCGACC TCGCCGCCGA GGCCGCGCGC GTGGCCAAGG CCGACCTGCA ATCCGCGATG
GTGGGCGAGT TCCCGGAGCT TCAGGGGACG ATGGGCAGCT ACTACGCCCG CGCCGCGGGC
CTCCCCGAGC CGGTGGCGCT GGCCTGCAAG GCCCATTACC AGCCGCTCGG CCCCTCCGAC
GCGGTGCCGA CCGACCCCGT CTCGGTCGCC GTGGCGCTGG CCGACAAGAT CGACACGCTC
ACAGGCTTCT GGGCTATCGA CGAGAAGCCC ACCGGGAGCA AGGACCCCTT CGCGCTGCGG
CGGGCGGCGT TGGGGGTTGT TCGACTTTTG CTCATGAATG GCCTGCGTCT CTCCTTGCTT
AATCAGGTTC GCTTCGCGCA TGGCTGCTTG GCCGAGCAGT TTAACAGCCG CTTCAATTTC
TTTGTTCAGA TCCGAGAAGA ACCCAAAGAG GCCGTCAATA TCGGGGTTGG GCATCGCTAT
CCTGAGGTGG TGAGCGATCA GTGCACCAGC ATCCTCATGG GCTACGTCGA AAACCCCGTT
GAATCGGTCG CTTCCGGCAA ATTTACCATT GACGGGCGGG CCGTGGGCAC AAAGCCATTG
CGGCTTCTCG ATAATGACCT CCTCTCCTTC TTCCACGACC GCCTCAAGGT CCACCTGCGC
GAGCAGGGGA TCCGGCATGA CGTGATCGAC GCCTGCCTCG CCATGCCCGG CAACGACGAT
CTGACCCTCC TCGTGAAACG CGCCGAGGCC CTCTCGGCCT TCCTCAAGAC CGACGATGGC
ACCAACCTCC TGCAGGGCTT CAAGCGCGCG AACAACATCC TCGCGCAGGC CGAGGCCAAG
GACGGCGTCG AATATTCCTT CGGCGCCGAT CCGAAGTTCG CCGAGACCGA CGCGGAGCGC
GCGCTCTTCG CCGCCCTTGA ACAGGCCGAG GCTGCCATCG CCCCCGCCAT GCAGGCCGAA
GACTTCGGCG CCGCCATGGC CGCCATGGCC GCCCTCCGTG CCCCGATCGA CGCCTTCTTC
GACACGGTCC AGGTCAATGC CGACAATCCG GTCCTGCGGC GCAACCGGCT CAACATGCTC
CATTCCATCC GCGCCACCTG CGCGAGCGTG GCCGACCTCA CCCGGATCGA GGGCTGA
|
|---|
| Protein sequence | MPDLLIELFS EEIPARMQAR AREDLKKLVT DGLVEAGLTY ASAGAFSTPR RLVLSVEGLS
AESPTLREER KGPKADAPAA AIEGFLRSTG LTRDQLETRE DKKGAVLFAV VEKPGRRAPD
IVAEVLERTI RTFPWPKSMR WGTGSLRWVR PLHSILCLLS DEAGSQVVPV TVDQVTAVNT
TEGHRFMAPG RFAVTGFDDY RAKLQRALVM LDAAEREQAI WHEATTQAFA QGLEVVPDAG
LLAEVAGLVE WPVVLMGPIG EEFLGLPPEV LQTSMREHQK FFSVRNPATG RIEKFVTVAN
RETADHGATI LKGNAKVLSA RLSDASFFWE NDRRTVQTVG LEGMAAGLAH VTFHNKLGSQ
ADRIARIEAL AREIAPLVGA SPDLAAEAAR VAKADLQSAM VGEFPELQGT MGSYYARAAG
LPEPVALACK AHYQPLGPSD AVPTDPVSVA VALADKIDTL TGFWAIDEKP TGSKDPFALR
RAALGVVRLL LMNGLRLSLL NQVRFAHGCL AEQFNSRFNF FVQIREEPKE AVNIGVGHRY
PEVVSDQCTS ILMGYVENPV ESVASGKFTI DGRAVGTKPL RLLDNDLLSF FHDRLKVHLR
EQGIRHDVID ACLAMPGNDD LTLLVKRAEA LSAFLKTDDG TNLLQGFKRA NNILAQAEAK
DGVEYSFGAD PKFAETDAER ALFAALEQAE AAIAPAMQAE DFGAAMAAMA ALRAPIDAFF
DTVQVNADNP VLRRNRLNML HSIRATCASV ADLTRIEG
|
|---|
| |