| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0582 |
|---|
| Symbol | |
|---|
| ID | 5082887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 584393 |
|---|
| End bp | 584845 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640482137 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001166793 |
|---|
| Protein GI | 146276634 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.378834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA TGATGACCGC CGCGCTTCTT GCGGCGGCGC TGGCGCTGGG GGGCTGTGGC
GGAGGCGCCA CGTCCACGGA CGGGCGCGGC GAAGGCTCGG GTCAGCCCGA GGTGATGCGG
ATGGTGAGCG ACTATGCCAG GCTCTACCAG GTTCCGCCGT CGCTGATGCA CCGCGTGGTG
CGGGGCGAAA GCGGCTACAA TCCGGCGGCG CGCAACGGGC CCTACATGGG GTTGATGCAG
ATCCATCCCC AGACCGCCAA GACCATGGGC TACAAGGGCG AGGCCGAGAG GCTGCTCGAC
GCGCGGACGA ACCTGACCTA CGGCGGCAAA TATCTGCGCG GCGCGTGGCT GGTGGCGCGC
GGCAACGAAG AGCGCGCGAT CCAGTGGTAT CGCAACGGCT ATTACTACGA GGCCAAGCGC
CTCGGGCTGC TCGAAGAAAC CGGCCTGCGC TGA
|
|---|
| Protein sequence | MKVMMTAALL AAALALGGCG GGATSTDGRG EGSGQPEVMR MVSDYARLYQ VPPSLMHRVV
RGESGYNPAA RNGPYMGLMQ IHPQTAKTMG YKGEAERLLD ARTNLTYGGK YLRGAWLVAR
GNEERAIQWY RNGYYYEAKR LGLLEETGLR
|
|---|
| |