Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0555 |
Symbol | |
ID | 5082823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 556239 |
End bp | 557036 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482110 |
Product | TatD family hydrolase |
Protein accession | YP_001166766 |
Protein GI | 146276607 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCC AAACGCCCCC GCAGATCGTC GACAGCCATT GCCACCTGGA TTTCCCCGAC TTCGACGGCG AACATGCGGC GCTGATCGAA CGGGCACGGG CGGCCGGGGT CACGCGTATG GTCACGATCT GCACCCGCCT GCGCCACGAG CCGCGGGTGC GCGCCATCGC CGAGGCGCAT GAGGGGGTCT TCTACGCCGC GGGCACCCAC CCGATGAGCG CCGCGGAAGA GCCCATGGCC ACCGTCGAGG AGCTGGTGGC GCTGGCCGCC CATCCGAAGT TCGTGGGCAT CGGGGAAAGC GGGCTCGACT ACCATTACAC GCCCGAAAGC GCGCCCGTTC AGCAAGAGAG CCTGCGCATC CATATCGAGG CCGCGCGACG CACGGGCCTG CCGCTCATCA TCCATGCGCG CGATGCCGAC GAGGACATGG CCCGCATCCT GACGGAAGAG CATCGTGCGG GCGCCTATTC CTGCGTGATG CATTGCTTCT CGTCGGGGGC GGCGCTGGCG CGGGCCGCGC TGGATCTGGG CTTCTACCTC TCGATGTCCG GGATCGCGGC CTTCCCGAAA TCGGCCGAGC TGCGCGCGAT CTTCGCCGCG GCCCCGCTCG ACCGCATCCT GCTGGAAACC GACAGCCCCT ATCTCGCCCC CCCGCCCTAC CGCGGCAAGC GCAACGAGCC GGCCTACACT GCCCACACGG CCGCGAAGGG CGCCGAGGTC TTCGGCCTGA ACCTGTCAGA CTTCGCCGCC GCCACCTCGG CCAACTTCGA CCGGCTGTTC GCGAAGGCCG CCGCCTGA
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Protein sequence | MTPQTPPQIV DSHCHLDFPD FDGEHAALIE RARAAGVTRM VTICTRLRHE PRVRAIAEAH EGVFYAAGTH PMSAAEEPMA TVEELVALAA HPKFVGIGES GLDYHYTPES APVQQESLRI HIEAARRTGL PLIIHARDAD EDMARILTEE HRAGAYSCVM HCFSSGAALA RAALDLGFYL SMSGIAAFPK SAELRAIFAA APLDRILLET DSPYLAPPPY RGKRNEPAYT AHTAAKGAEV FGLNLSDFAA ATSANFDRLF AKAAA
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