Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0449 |
Symbol | |
ID | 5082248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 445783 |
End bp | 446256 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482002 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001166660 |
Protein GI | 146276501 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0116911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCGTA AGGGGATCGT TGCCGCGGCT GCGGCGGCGG CCCTCGCCAT CGCGGTGCCG TTCGGCGTGA AGTGGGAGGG GACCGTCCTC ACGCCCTATT GGGACCGCTT TGGCAAAGTC TGGACAGTCT GCACGGGCGA GACCGCCGTC GAGATGCGGC CTTACACCAT GACGGAATGC ATGGAGATGC ACGAGGCGCG CGTGGGGCAG GGCTACGCCC GCGTGGTCGC GGCATTCCCG CGCCTCGCCA GCGCGCCGCC GGAGGTGGCA GCCATGGCCG TGGATCTTGA ATACAACGCC GGTCTCGGCT CGATCTTGCG CGCGAAGAAC ACCAGCGCCG CCCTGCGCGA TGGCCGGTGG CGGGACTTCT GCAACCTCTT GCCTTCTTGG TCGAAGAGCG GCGGCAGCTT CGTGCCAGGG CTCCTCAACC GCCGCAAGGA GGCGCAGGTG ATCTGCCTTC GGGGACTGCG ATGA
|
Protein sequence | MARKGIVAAA AAAALAIAVP FGVKWEGTVL TPYWDRFGKV WTVCTGETAV EMRPYTMTEC MEMHEARVGQ GYARVVAAFP RLASAPPEVA AMAVDLEYNA GLGSILRAKN TSAALRDGRW RDFCNLLPSW SKSGGSFVPG LLNRRKEAQV ICLRGLR
|
| |