Gene Rsph17025_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0449 
Symbol 
ID5082248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp445783 
End bp446256 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content68% 
IMG OID640482002 
Productglycoside hydrolase family protein 
Protein accessionYP_001166660 
Protein GI146276501 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0116911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTA AGGGGATCGT TGCCGCGGCT GCGGCGGCGG CCCTCGCCAT CGCGGTGCCG 
TTCGGCGTGA AGTGGGAGGG GACCGTCCTC ACGCCCTATT GGGACCGCTT TGGCAAAGTC
TGGACAGTCT GCACGGGCGA GACCGCCGTC GAGATGCGGC CTTACACCAT GACGGAATGC
ATGGAGATGC ACGAGGCGCG CGTGGGGCAG GGCTACGCCC GCGTGGTCGC GGCATTCCCG
CGCCTCGCCA GCGCGCCGCC GGAGGTGGCA GCCATGGCCG TGGATCTTGA ATACAACGCC
GGTCTCGGCT CGATCTTGCG CGCGAAGAAC ACCAGCGCCG CCCTGCGCGA TGGCCGGTGG
CGGGACTTCT GCAACCTCTT GCCTTCTTGG TCGAAGAGCG GCGGCAGCTT CGTGCCAGGG
CTCCTCAACC GCCGCAAGGA GGCGCAGGTG ATCTGCCTTC GGGGACTGCG ATGA
 
Protein sequence
MARKGIVAAA AAAALAIAVP FGVKWEGTVL TPYWDRFGKV WTVCTGETAV EMRPYTMTEC 
MEMHEARVGQ GYARVVAAFP RLASAPPEVA AMAVDLEYNA GLGSILRAKN TSAALRDGRW
RDFCNLLPSW SKSGGSFVPG LLNRRKEAQV ICLRGLR