| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3785 |
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| Symbol | |
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| ID | 3837242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4334832 |
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| End bp | 4336958 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637827910 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_428866 |
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| Protein GI | 83595114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.668029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTGT TCAACGTGTT CCGCAAGGAA ATCGAATGGG GCGGGCGCAA GCTGGTCCTC
GAGACCGGGC GCATCGCCCG TCAGGCCGAT GGCGCGGTGA TGGCCAGCCT GGGCGACACC
ACGGTGCTGT GCACCGCCGT CGGCGCGAAG ACGAAGTCGA AGTTCGATTT CTTTCCGCTG
ACCGTGAACT ACCAGGAAAA GACGTTCGCC GCCGGTAAGA TCCCGGGCGG TTTCTTCAAG
CGCGAGGGTC GTCCGAGCGA GAAGGAAACC CTGGTTTCCC GCCTGATCGA CCGGCCGATC
CGGCCGCTGT TCGTTCATGG CTACAAGAAC GAAACCCAGC TGGTTTGCAC CGTTCTGTGC
CACGACCTTG AAAACAACCC CGATATCGTC GCCATCGTCG GCGCCTCGGC GGCTTTGACC
CTGTCGGGCC TGCCCTTCCT CGGCCCCATC GGCGCCGCCC GCGTCGGTCT GATCGACGGC
GCCTTCGTGC TGAACCCGAC CCGTGATCAG ATGGCCGACT CGGTCCTCGA TCTGGTGGTC
GCGGGCACCC GCGAAGGCGT GCTGATGGTC GAATCCGAGG CCCACGAGCT GTCCGAGCAG
CAGATGCTCG ACGCGGTGAT GTTCGGCCAC GAGGGCTATC AGCCCGTCAT CGACGCCATC
ATCGCCCTGG CCGAACAGTG CGCCCGCGAG CCCCGCGCCA TCGAGCCGCC GGCCCCCGAG
GCCGAGGCCG TGGCCGCCAA GGTTCGTGAA GTCGGCGAAG CCGGTCTGCG CGACGCCTAT
AAAGAAGCCG ACAAGATGGT CCGCCACGAC AAGGTGGATG CCGTCCGCGA CGCCGTGACC
GCCGCCTTCG CCGGCGACGA CGCCGCCCTC GCCCTGGCCG GCGCCGCCTT CAAGGATCTG
GAGAAGGACA TCGTCCGCGG CTCCATCCTT GATACCGGCC TGCGCATCGA CGGTCGCGAC
ACCAAGACCG TGCGCCCGAT CGAAATCTAT CCGGGCATCC TGCCGCGCGC CCATGGTTCG
GCGCTGTTCA CCCGGGGCGA GACCCAGGCG CTGGTCACCA CCACGCTCGG CACCGGCCAG
GATGAGCAGA TCATCGACGC CCTGGAAGGC GAATACCGCG AAAACTTCAT GCTGCACTAC
AACTTCCCCC CCTATTCGGT GGGCGAGGCC GGGCGCATGG GGTCTCCGGG CCGTCGTGAA
ATCGGTCATG GCAAGCTGGC TTGGCGCGCC ATCCATCCGA TGATGCCGGC CAAGGACGCC
TTCCCCTACA CCGTCCGCGT CGTCTCCGAG ATCACCGAGT CGAACGGTTC GTCGTCGATG
GCCACCGTCT GCGGCACCTC GCTCGCCCTG ATGGATGCCG GCGTGCCGCT CAAGAACGCC
GTGGCCGGTA TCGCCATGGG CCTGATCAAG GAAGACGAGC GCTTCGCCGT GCTCTCCGAC
ATCCTGGGCG ACGAGGATCA CCTCGGCGAC ATGGACTTCA AGGTGGCCGG TACCGCCAAT
GGTATCACCA GCTTGCAGAT GGACATCAAG ATCACCTCGA TCACCAAGGA GATCATGAAT
GTCGCGCTCA ACCAGGCGAA GGACGGGCGC ATCCATATCC TGGGCGAGAT GACCAAGGCC
CTGGGCAACG CCCGGTCGGA CGTGTCCGAT TTCGCGCCGC GCATCACCAC CATCAAGGTG
CCGCCGCAGA AGGTTCGCGA GGTCATCGGT TCGGGCGGCA AGGTCATCCG CGAGATCACC
GAAGTCACCG GCACCAAGAT CGATATCGAA GACGACGGCA CGATCAAGAT CGCCTCGGCC
GATGCCGAAG CGACCCAGCG CGCCGTCGAT TGGATCAAGG GCATCGTCGC CGAGCCCGAG
ATTGGCGTGG TCTACACCGG CAAGGTGGTC AAGATCATGG ACTTCGGCGC CTTCGTGAAC
TTCCTCGGCA CCCGCGACGG TCTCGTCCAT ATTTCCGAGC TGTCCCAGGA CCGGGTCAAG
AAGGTCGGCG ATGTGGTCAA TGTCGGCGAT CAGGTGAAGG TGAAGTGCGT CGGCTTTGAC
GATCGCGGCA AGATCAAGCT GTCGATGAAG CAGGTCGATC AGGTCACCGG CGCCGATTTG
TCGACGCAGG CCCCCGCGGA AGAGTAA
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| Protein sequence | MSLFNVFRKE IEWGGRKLVL ETGRIARQAD GAVMASLGDT TVLCTAVGAK TKSKFDFFPL
TVNYQEKTFA AGKIPGGFFK REGRPSEKET LVSRLIDRPI RPLFVHGYKN ETQLVCTVLC
HDLENNPDIV AIVGASAALT LSGLPFLGPI GAARVGLIDG AFVLNPTRDQ MADSVLDLVV
AGTREGVLMV ESEAHELSEQ QMLDAVMFGH EGYQPVIDAI IALAEQCARE PRAIEPPAPE
AEAVAAKVRE VGEAGLRDAY KEADKMVRHD KVDAVRDAVT AAFAGDDAAL ALAGAAFKDL
EKDIVRGSIL DTGLRIDGRD TKTVRPIEIY PGILPRAHGS ALFTRGETQA LVTTTLGTGQ
DEQIIDALEG EYRENFMLHY NFPPYSVGEA GRMGSPGRRE IGHGKLAWRA IHPMMPAKDA
FPYTVRVVSE ITESNGSSSM ATVCGTSLAL MDAGVPLKNA VAGIAMGLIK EDERFAVLSD
ILGDEDHLGD MDFKVAGTAN GITSLQMDIK ITSITKEIMN VALNQAKDGR IHILGEMTKA
LGNARSDVSD FAPRITTIKV PPQKVREVIG SGGKVIREIT EVTGTKIDIE DDGTIKIASA
DAEATQRAVD WIKGIVAEPE IGVVYTGKVV KIMDFGAFVN FLGTRDGLVH ISELSQDRVK
KVGDVVNVGD QVKVKCVGFD DRGKIKLSMK QVDQVTGADL STQAPAEE
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