Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3613 |
Symbol | aroE |
ID | 3837069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4151909 |
End bp | 4152760 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637827737 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_428694 |
Protein GI | 83594942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACCG GCAAGGCCCG GGTCGCCGGG GTGATCGGCT GGCCGGTCGG TCATTCGCGC TCGCCCCGTC TGCATGGCTT CTGGCTGGCC CGCCACGGCA TCGATGGCGC CTATGTGCCC TTGGCCGTCG CCCCCGAGGC GCTGGAGCGC GCCCTCGCCG CTCTGCCCGC CCTGGGGCTG GCCGGGGTCA ATGTCACCGT TCCCCATAAG GAGCACGCGC TGGCGCGCAT GGACGCCCTG ACCGAACGGG CGCGGCGGAT CGGCGCGGTC AATACCATCG TCTGCCAGAG CGATGGCCGG CTGCTTGGTG ACAACACCGA TGGCTTCGGC TTTCTTGAGA ACCTGCGCCA GCGGCGGCCG GACTGGCGGG CCGGGCACGG TCCGGCGGTG GTGCTGGGCG CCGGCGGCGC GGCGCGGGCG GTCTGCGCCA GCCTGCTCGA GGCGGGCTGT CCGGCCCTGA CCCTGGTCAA TCGCGATCAG GGGCGGGCCC GCGCCCTGGC CGAGGCCCTG GCCGCTTGGT CGCCGGTGCC GATCACCCTG GCGACCTGGG ACGAGGCGCC CCGGACCCTG GGCGGCGCGG CGCTGCTGGT CAATACCACC TCGTTGGGCA TGGTCGGCCA GCCGCCCCTG GATCTGGACC TACGGGGCCT CGCGCCGAGC GCCCTGGTCA CCGATATCGT CTATGCCCCC CTGGAAACTC CCCTGCTGGC GCGGGCCCGG GCTTTGGGCC TGGCCACCGT CGATGGCCTG GGCATGCTTC TCCACCAGGG GCGGCCGGGG TTCGAGGCGT GGTTCGGCGT CGCCCCCGAG GTTGACGACG CGCTGCGCGC CGCGGTTTTG GGTAAACCTT AG
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Protein sequence | MITGKARVAG VIGWPVGHSR SPRLHGFWLA RHGIDGAYVP LAVAPEALER ALAALPALGL AGVNVTVPHK EHALARMDAL TERARRIGAV NTIVCQSDGR LLGDNTDGFG FLENLRQRRP DWRAGHGPAV VLGAGGAARA VCASLLEAGC PALTLVNRDQ GRARALAEAL AAWSPVPITL ATWDEAPRTL GGAALLVNTT SLGMVGQPPL DLDLRGLAPS ALVTDIVYAP LETPLLARAR ALGLATVDGL GMLLHQGRPG FEAWFGVAPE VDDALRAAVL GKP
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