Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3435 |
Symbol | |
ID | 3836887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3955832 |
End bp | 3958888 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637827556 |
Product | hypothetical protein |
Protein accession | YP_428516 |
Protein GI | 83594764 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCCCG ACGCCGTCCA AACCATTCCC GCCGGACTGC CCTTCCTCGA CACCCTGGCG GCGGGCATCG TGGACCGACT GGGCGACCGG ACGGCCGATC CGCTGGCCGC CACCCGCGTC ACCGTGCTGT TGCCGACGCG GCGCGCCTGC CGGGCCCTGC GCGAGGCCTT CCTGAGGATC GAGGGCGGCA AGGCCGCCCT GCTGCCGCGC ATCCTGCCTT TGGGCGATCT TGAAGAAGAC GAATCGGCCG GGGCCGGACT GGCCGATGGC GCTCTCCGCC CAACCCTCGA CTTCGCGCCG CCCATCGCGC CGCTCGAACG TCAGGTGCTG CTGGCGCGGC TGATCCTCGC CCGCGATAGC GCCAAGGCCA CGGCGGGCGG CGATAGCGCC ATGACCCCGG CCCAGGCGCT GCGCCTCGCC CAGGATCTGG CCGGGCTGCT CGATCTGGCG CAGACCGAAC ACATCGACCT GTCCACCGTC GCCGCCCTGG TTCCCCAAAC CTCGCCGCTG GCCGAGCACT GGCAACTCAC CCTTGATTTC CTCGCCCTGC TGACCTCGGT TTGGCCGGGA TTGCTGGCCG CCCACCACGC CCTTGATCCC GCCGACCATC GCAACAAGGT GCTCGACGCC CAAGCCGCCG CCTGGGCCGC CCATCCGCCG GCCGGCCCGG TGATCGCCGC CGGCTCCACC GGATCGGTCC CGGCCACCGC CGCCCTGCTC GCCACCATCG CCCATCTGCC CCAGGGGCTG GTGGTGTTGC CCGGCCTTGA CATCGGGCTT GATGACGAAA GCTGGGAGGC CTTGGAAGAC AGCCATCCCC AGGCCGGCAT GAAACGCCTG CTCGACACCC TGGGCCTGTC GCGCCAGGCC GTGAGGTTTT TTTCCGAAAC CCCGCCCCGG GGCGCGATCG CCGCGCCACC GGCCCGTGCG CTTTTGGTGC GCGAGGCCCT GCGCCCGGCC GCCACCACCG ATCGCTGGCG ACGGCTGCGC GAGAGCGGTC CCTCGGGCGG GGAGGCCTTC GCCCGGGCAC TTGACGGGGT CACCCTGGTG CGCGCCGCCG GCCCGCGCGA GGAAGCCGCC GCCATCGCCG TGATGATGCG CGGCGCCTTG GAAACCCCTG GGCGCACCGC CGCCCTGATC ACCCCCGATC GCGCCCTGGC CCGCCGGGTC GCCGCCGCCC TTGGCCGCTG GGGATTGCGC GTCGATGACA GCGCCGGCCG GCCGCTGTCG CAAACCCCCG TCGGCGCCTT CCTGCGGCTG GCCGCCCAGG CGGTGGCCGA TGGCCTGGGG CCGGTCGCCC TGTTGTCGCT GCTTCAGCAT CCCTTGGCGG CTGGCGGCGA GGATCCGGTG GTCTTTCGCG CCCGCCTGCG CCTGCTCGAC CGCGAGGTCC TGCGCGGCCC GCGTCCCGAC CCCGGGGTGG CTGGGCTCGC TCAGGCGATC AAGGCCGCCG ATGATCCGGA CATGGAGCGC CACCTTGGCG GTTGGCTGGA GCGGCTTGAA GCTTTGGCCG GGCCGTTCTG CACCCTGATG GACAGCGACG AGCCGGTCGA CGTCGCCGCG CTCATCGATG CCCATATGCG CTTTTGCGAA GGGCTGGCCG AGGCCCGCGA GGGTGGCGTG GAAAAGCCCG GCGCCACCCG GCTGTGGGCT GGTGACGATG GCGAGGCCGC CGCCCTGCTT GGCGCCGATC TGACCGAAGC CGCCCCCTCG CTGGGCGCCA TCGCGCCCCG CCACTACCCG GCCCTGCTTG ATGCCCTGAT GGACGGGCGG GCGGTGCGGC CCAAGCGCGA TCTTCATTCG CGGCTGTTCC TGTGGGGACC GCTGGAAGCC CGCTTGCAGC GCGCCGATCT GCTGATCCTG GGCGGGCTGA ACGAGGGCGG TTGGCCGGCC GCCGTCGATA CCGGCCCGTG GATGAGCCGG CCGATGCTCG ATCAGATCGG CCTGCCCCAG CCCGAGCGCC GCATCGGCTT AGCCGCCCAC GACGTTTCCC AGGCGCTCTG CGCCCCCGAG GTGGCGATCA CCCGGGCCCT GCGCGTCGAG GGCACGCCGA CCGTGCCTTC GCGCTGGCTG ACCCGCCTTG ACGCGGTGAT CGGCGCCACC GGATTGGACA AGGAGTGGGC GAAGGCCCGC CAGCGCGGCG ACCGCCTGCT CGCCCTGGCC CGCAGCCTGG AACAGCCCCA GGGTGAACGC AAACCCTGCC CCGCCCCCGA GCCGCGCCCG CCGCTGGCCG ACCGGCCGCG CCGGCTGTCG GTCACCCGCA TCGAAACCTG GATGCGCGAC CCTTACGCCC TCTATGCCCA GTTCATCCTG GGGCTGAGCG AGCTTGATCC CCTGGAGGCC GACCCCGGGG TGTCCGATTA CGGCACCCTG GTCCACGGCG CCCTTGAGGA TTTCGTCGGC CTTTATCCCA AGGACCTGCC CGGCGACCCC GAGGCCGAGA TCATTCGCCT GGGAACCCTG CGTTTCGCCC CGCATATGAC GCGGCCGGGC GTGCGCGCCT TCTGGTGGCC GCGCTTCCTG CGCATCGCGC ATTGGATCGC CGAGCGTGAG ATCGAACGCC GCCCCGAGAT CCTTGAGGTC TTCGCCGAAC GCCGCGCCGA AATGACCCTG ACCGGTCCGG CCGGCCCCTT CATCCTGACC GCCAAGGCCG ATCGCATCGA TCTGCGCCGC GATGGCACCC TGGCGGTGAT CGACTATAAA ACCGGCATGC TGCCCTCGAA AAAGGAAGTC GAGTCGGGGT TGTCGCCGCA GTTGCCCCTG GAAGCGCTTC TCGCCTCGCG AGGCTGCTTT CCTGGCATTG CCGGCAAGCC GGTCAGCGAT CTTGGCTTCT GGAAGCTGCG CGGCGATCGC CTGGGCGGCG AGATACGCCA GGCCGCCGAT GATCCCGAGG GGGTGGCCGA AGCGGCCCAT AAGGGCTTGA GCGATCTGAT CACCGCCTTT GATAATCCCG ACACCCCCTA TTTCGCCCGC CCCCATCCCG ACCACGCCCC GCGCTTCAAT CCCTATCAGC ATCTGGCCCG GGTCAAGGAA TGGGCCGAGA AAGGCGACGC CGAATGA
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Protein sequence | MRPDAVQTIP AGLPFLDTLA AGIVDRLGDR TADPLAATRV TVLLPTRRAC RALREAFLRI EGGKAALLPR ILPLGDLEED ESAGAGLADG ALRPTLDFAP PIAPLERQVL LARLILARDS AKATAGGDSA MTPAQALRLA QDLAGLLDLA QTEHIDLSTV AALVPQTSPL AEHWQLTLDF LALLTSVWPG LLAAHHALDP ADHRNKVLDA QAAAWAAHPP AGPVIAAGST GSVPATAALL ATIAHLPQGL VVLPGLDIGL DDESWEALED SHPQAGMKRL LDTLGLSRQA VRFFSETPPR GAIAAPPARA LLVREALRPA ATTDRWRRLR ESGPSGGEAF ARALDGVTLV RAAGPREEAA AIAVMMRGAL ETPGRTAALI TPDRALARRV AAALGRWGLR VDDSAGRPLS QTPVGAFLRL AAQAVADGLG PVALLSLLQH PLAAGGEDPV VFRARLRLLD REVLRGPRPD PGVAGLAQAI KAADDPDMER HLGGWLERLE ALAGPFCTLM DSDEPVDVAA LIDAHMRFCE GLAEAREGGV EKPGATRLWA GDDGEAAALL GADLTEAAPS LGAIAPRHYP ALLDALMDGR AVRPKRDLHS RLFLWGPLEA RLQRADLLIL GGLNEGGWPA AVDTGPWMSR PMLDQIGLPQ PERRIGLAAH DVSQALCAPE VAITRALRVE GTPTVPSRWL TRLDAVIGAT GLDKEWAKAR QRGDRLLALA RSLEQPQGER KPCPAPEPRP PLADRPRRLS VTRIETWMRD PYALYAQFIL GLSELDPLEA DPGVSDYGTL VHGALEDFVG LYPKDLPGDP EAEIIRLGTL RFAPHMTRPG VRAFWWPRFL RIAHWIAERE IERRPEILEV FAERRAEMTL TGPAGPFILT AKADRIDLRR DGTLAVIDYK TGMLPSKKEV ESGLSPQLPL EALLASRGCF PGIAGKPVSD LGFWKLRGDR LGGEIRQAAD DPEGVAEAAH KGLSDLITAF DNPDTPYFAR PHPDHAPRFN PYQHLARVKE WAEKGDAE
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