Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3343 |
Symbol | |
ID | 3836795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3855304 |
End bp | 3856020 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637827464 |
Product | pyrimidine 5-nucleotidase |
Protein accession | YP_428424 |
Protein GI | 83594672 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGACA AGATGACAAG ACCGGCCGAG GGCTTTGAGA CTTGGCTCTT CGATCTTGAT AATACCCTCT ATCCCGCCTC CGCCGATCTG TTCGCCCAGA TCGATCTGCG GATGAAGGCC TATATCGGGC GGCTGCTTGG CCTGCCGCCC GAAGAGGCGT TTCGCCTGCA AAAGCATTAC TACCACACCT ATGGGACCTC GCTGCGCGGC TTGATGGACG AACACGCCAT CGATCCGGCC GACTTCCTGG CCTTCGTCCA CGATATCGAC CATACCGTCC TCGCCGCCGA TCCGGTCCTG GGCGGGCTTC TCGCCCGCCT TCCCGGGCGC AAGATCGTCT TCACCAATGG CAGCACCCGC CATGCCCTGG CGGTTCTCGA CCGACTCGGC ATCACCGATC ACTTCGAAGC GATCCATGAT ATCGCCGCCA GCGGCTTCAT TCCCAAGCCG CAGCCCGCCT GTTACGACGA TCTTATCGCC CGCTATGGCC TTGATCCGGC GACGACGATC ATGGTCGAGG ATTCCCATAA GAATCTCCAA CCGGCGGCGG CGCTGGGCAT GACCACCCTT CTCGTGCGCA ATACCCTCCA TTGGGCTGCC GTCGAGGACG GGGGCGCCCC CATGGCTTAT TGCCATCATG TGACCGACGA TCTGCGGATC TGGCTGGCCG ACTGGCTGGC CCACCAGGCC CCCCATCCGG AAGTCTGCTT AGATTAA
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Protein sequence | MEDKMTRPAE GFETWLFDLD NTLYPASADL FAQIDLRMKA YIGRLLGLPP EEAFRLQKHY YHTYGTSLRG LMDEHAIDPA DFLAFVHDID HTVLAADPVL GGLLARLPGR KIVFTNGSTR HALAVLDRLG ITDHFEAIHD IAASGFIPKP QPACYDDLIA RYGLDPATTI MVEDSHKNLQ PAAALGMTTL LVRNTLHWAA VEDGGAPMAY CHHVTDDLRI WLADWLAHQA PHPEVCLD
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