| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3134 |
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| Symbol | |
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| ID | 3836580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3613334 |
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| End bp | 3614950 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637827249 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_428216 |
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| Protein GI | 83594464 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.324571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGCGC TTTTTGGTCT GAGCGATCTT CTCGCCCGCG CCTGCGACCA CACCCCGGCG
GCCACCGCCC TGTCACAAGC CGGCGCGATC AGCCGCTCAG CGCCGCCCTG CCTGACCTAT
GAAGGGTTGT TCAACCGGGT GTGCCGTTTG GCCTCCGGCT TCAAAGCCTT GGGGCTGAGG
CCGGGCGAGC GGGTGGCGGT GATCGCCGAA AAACGCTTTG ACGCGGTGGC GGCGATGTTT
GCCGTCGCCC ATGCCGGGGG CGTTTTCGTT CCGATCAACC CGGTGCTGAA AAGCCCGCAG
ATCGTCCATA TCCTGGCCGA TTCGGCAGCG AAAATCCTGG TCGCCCCGGC TCTGCGGCTG
GCCTTGCTCG ACCATACGCC GCCGCCCTCG CTCACCACCC TCCTCCGCTT CGGCGACCCG
GCGCCCGCCT CCCCCGATCC GCCCCCCGGG GGGGAGAGCC TTGATCTCGA CGCGCTGGCC
GGGGCTGGCG ATCCGATCGC CGCCCACCCC GTCGTCGATG ACGATCCGGC CTGCTTTTTC
TATACCTCGG GCTCCACCGG CCTGCCCAAG GCGGTGGTCG TCACCCACCG CAACCTGATC
GCCGGGGCGC AAAGCGTCGC CAGCCGCCTG GACAACCGCC CCGATGACCG CCTGCTCGCC
GCCCTGCCCC TGGGCTTTGA CGCCGGCTTC AGTCAACTGA CCACCGCCTT CGCCGTCGGC
GCCGAGGCCG TTTTGCATGA CTACCTGCTG CCCCAGGATG TGATCACCGC CTGCGCCCAC
CACCGCATCA CCGGGCTGAC CGGGGTTCCG CCGCTCTGGG CCCAACTCGC CCGCCTCGAC
TGGCCGCCCG CCGCCACCGC CTCCTTGCGT TTTCTCGCCA GCACCGGCGG AGCGATGCCC
GCAGCGGTGC TGGCCCGCCT GCGCGCCCTG GCGCCCCTGG CGCGCATCCA TCTGATGTAT
GGCCTGACCG AGGCTTTCCG CTCGACGACG CTCGATCCAG AGCGCGTTGG CCGCAAACCC
GGCTCGGTCG GCCGGGCGGT CGCCAATGCC GAGGTTCTGG TGCTGCACCC CGATGGCGGC
CGCTGCGCCC CGAACGAGAT CGGCGAGATC GTCCATCGCG GCGCCTTCGT CGCCAAGGGC
TATTGGAACG ATCCCGAGGG CACGGCGCGG CGCTTCCGCC CGATCCCCCC CCACCCCGGC
GAGCCGTCGC GCCCGGGCCT GGCCGTCTGG TCGGGGGATT TGGGCTGGCA AGACGACGAG
GGCGATTTGA CCATCGTCGG CCGCTCGGAA GGGCTGATCA AGACCTCGGG CTATCGGGTC
AGCCCGACCG AGATCGAGGC GCCGGCCCAT GCCAGCGGCC TGATCGAAGA CGCCGTGGCC
TTCGGCCTGC CCGACCCGCT TCTGGGCGAG CGGCTGGCCC TGGTGGTCAC CGCCCCGCCC
GGCGGCGCGC CCGTCGACCT CGACGCCTTG CGCCGCCATC TGCGCGCCCA GTTGCCAGCC
TATCTGGTAC CGGCCCTGCT GACCCAGGTG GACAGCCTGC CGCGCACGGC CAGCGGCAAG
GCCGATCGGG CGGCGGCGCG GGCGAGGATG CTCAAGGACC AGGAGTCTCC GCCATGA
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| Protein sequence | MRALFGLSDL LARACDHTPA ATALSQAGAI SRSAPPCLTY EGLFNRVCRL ASGFKALGLR
PGERVAVIAE KRFDAVAAMF AVAHAGGVFV PINPVLKSPQ IVHILADSAA KILVAPALRL
ALLDHTPPPS LTTLLRFGDP APASPDPPPG GESLDLDALA GAGDPIAAHP VVDDDPACFF
YTSGSTGLPK AVVVTHRNLI AGAQSVASRL DNRPDDRLLA ALPLGFDAGF SQLTTAFAVG
AEAVLHDYLL PQDVITACAH HRITGLTGVP PLWAQLARLD WPPAATASLR FLASTGGAMP
AAVLARLRAL APLARIHLMY GLTEAFRSTT LDPERVGRKP GSVGRAVANA EVLVLHPDGG
RCAPNEIGEI VHRGAFVAKG YWNDPEGTAR RFRPIPPHPG EPSRPGLAVW SGDLGWQDDE
GDLTIVGRSE GLIKTSGYRV SPTEIEAPAH ASGLIEDAVA FGLPDPLLGE RLALVVTAPP
GGAPVDLDAL RRHLRAQLPA YLVPALLTQV DSLPRTASGK ADRAAARARM LKDQESPP
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