Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3074 |
Symbol | |
ID | 3836520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3539235 |
End bp | 3540776 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637827189 |
Product | glycosyltransferase |
Protein accession | YP_428156 |
Protein GI | 83594404 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0020891 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTC CCTGGATCCA ATGCGCCACG GGAACGGCCG ATCGCGGCCG GGCGCTGTTG TATTCCCGCT GGGTCGGGCT GGCGGTGCTC TGCCTGCTGT GCCTCGTCCG CCTGTTGCTG AGCGCCGGCG GCACCATCCC CCCCCATCCC GACGAAGCGA TGCTCTGGGC CGCCGGTCAG CCGTTGGGGG CCGTCCTGGG CGGCGACCAC CCTTTGGTTT CGCTGATCCT GTCGGCCAGC GTCGAGCTTC TGGGCAATAC GGTTTTCGCC CTGCGCGCCC CCGGGGTGAT CGCCCTTGGC CTTGCCAGCA TCGCCGTCTG GCGGCTGGCC GGGCTGCTCT ATGACGCCCG GGTGGCTTTT TGGGCCGCCG TGGTCTTCGC CACCCTGCCG GTGGTCTCCT ATGCCTCGGC CATCGCCGGA ACGGCGGGGT TCCTGCCGCT GTTCTGGGCG GTGGCCCTGC ATGGGCTGCT GCGCGGCCTG AAGAGCGATT CCCTGGTTTG GTGGCTTGTT TTGGGCACGG CCTTCGGGCT TGGCCTGTTG ACCGACGGGG CGATGGCGCT TTTGGTGCCG TGCTTCCTGC TCTATGGCCT GCTGTCGCCC GAATACCATG CCCTGTGGCG GCGCCGGGGC CTGTGGCTGG CTTTGGGTCT GGGCTTGGCG ATCGCCGCCC CCGCCTTTTG GGCCGGTCTT CTGCACGCCG ATCTCACCCC CCAGCCGACG CCGGCGGCGG GCTTCGCCTT CCTGGTGGCC CAGGTCGCGG TTTTCGGGCC AATTCCGGCC ACCGTGCTGG CCTGGGTGGC GCTGCATCCC GGCGGCGGGG CGATGATCGG CGGATACGGG CCCGGTGACG AGCGCCGCGC CGCCGACGAG CGGGCGCGGC GCGGCTATCG CATCCGGTTC TTTCTGTCGT TCAGCCTGCC GGTGGTGGCC CTGGCCACCC TCGCCGCGGC GATGGGCGGC GCCCTGCCGG CGGAGGCGGC GGCGGTGGCC TATGTCGGCG GCGCCATCCT GGTGGCCTCG TGGCTGCTGA CGACGCCGTT GCGTCGCGGC CTGCTGCGGC TTTGCGTGGC GCTGCATATC CTGGGCGCCC TGCTGTTCTT CAATCTGGAT GGCCTGCTGC GCGACAGCGG CCTGCGCCCG CCCGCGGGGC TTGACCCCTT CGCCGATCTG CGCGGCATGG ACCGGGTGGC GGTTTGGGGC GGTGAACTGG CGGCGCGCTA TCCCGGGGTG CCGATGATCT TCGATGACCC GGGCATTCTG GCCAGCCTGC GCTTCCAGAG CCATCCCCGC TCCACCGTCA TGGTGCTGGC CAGCGCTCTG GGCGGAGCGG ATGCCATCGG TTTGGGACCG GCGCCCAACG GCATTCTGGT GATCACCCGC GCCCCGACCG GGCCCGATAC GCCCACTCCC GATACGCCCG CCGCCGATAC TTCCAATGAC GAGGGCGGGC GCGATGCCGG CTTCGTTGAT ATCGAAGCCG TTCCCGGGCG GTGGATATCG CTGCGCGCGC GCTTTCTGCC GCCCGCCGGA GAGCAACCAT GA
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Protein sequence | MDAPWIQCAT GTADRGRALL YSRWVGLAVL CLLCLVRLLL SAGGTIPPHP DEAMLWAAGQ PLGAVLGGDH PLVSLILSAS VELLGNTVFA LRAPGVIALG LASIAVWRLA GLLYDARVAF WAAVVFATLP VVSYASAIAG TAGFLPLFWA VALHGLLRGL KSDSLVWWLV LGTAFGLGLL TDGAMALLVP CFLLYGLLSP EYHALWRRRG LWLALGLGLA IAAPAFWAGL LHADLTPQPT PAAGFAFLVA QVAVFGPIPA TVLAWVALHP GGGAMIGGYG PGDERRAADE RARRGYRIRF FLSFSLPVVA LATLAAAMGG ALPAEAAAVA YVGGAILVAS WLLTTPLRRG LLRLCVALHI LGALLFFNLD GLLRDSGLRP PAGLDPFADL RGMDRVAVWG GELAARYPGV PMIFDDPGIL ASLRFQSHPR STVMVLASAL GGADAIGLGP APNGILVITR APTGPDTPTP DTPAADTSND EGGRDAGFVD IEAVPGRWIS LRARFLPPAG EQP
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