Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2971 |
Symbol | |
ID | 3836416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3421204 |
End bp | 3422436 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827085 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_428053 |
Protein GI | 83594301 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCAGC TTTCCCCGCC CACCGATCGC CATCGCGAGA TCGGATTTCC CGAGTTCGTC GGCTTGATGG CGATGCTGAT GGCGCTGACG GCGTTGTCGA TCGACGTCAT GCTGGTTGCC CTGGCCGATA TCTCGTCGGA CTACTTTTTG GCCGATGCCA ATGACCGCCA GTTGGTCATC ACCGCCTATC TGCTGGGGTT CGCCGTCGGC CAGCCGGTCT GGGGGCCGCT GTCGGACCGC ATCGGCCGCA AGCCGGTGCT GATCGCCGGG CTGGTGATCT ATGGCCTGGG CTGCCTGGGC GCCATGGTGT CGCCCAGCTT CGAAACCCTG CTCGCCGCCC GGCTGGTCCA GGGACTGGGC GGCGCCTCGC CCCGGGTGAT GACCATGGCC GTGGTCCGCG ACCGCTATGC CGGCAGTGGC ATGGCCCGGG TGATGTCGCT GTTGATGATG ATCTTCATCA TCGTGCCGAT CCTGGCGCCG ACCATGGGCA GCGCGGTGAT GGCCTTCGCC CCCTGGCACT GGCTGTTCGG CTTCATGATG GTTTTCGATC TCATCGTGCT GGTCTGGACC CTGACCCGGC TGCGGGAAAC CCACCGGCCC CAGCGCCAAC TCGCCCCGTC CTTGGGCGGG CTGCTGGAAA CCCTGCGTGT CGTCGTCAGC AACCGCCAGA CGGTGGGCTA TACGGTGGCC TTCGGCTTCA TGATGGGCAG TCTGATGGGC TATGTCGGCA CCGCCCAGCA GGTTTTCGTC GAGGTTTATC ACGAGGTCGA GCTGTTCCCG ATCCTCTTTG GCGCCATCGC CTCGGCCATC GCCGCCGCCT CGATCATCAA CGCCCGTTTC GTGACGCGGA TCGGCTCGCG GCGGATGTCC CATGCCGCCT TGCTGGGGTT CGTCGCCGTC GGGCTGGTGA CGGCGGCCTT CGGCTTCCCG GCCAAGCCGC CGCTTGCCCT GTTCATGGCG GCCCTGGGCA TCCAGTTCTT TTGCTTCGGC CTGATCGGGC CGAATTTCAA CGCCATGGCG ATGGAGCCGA TGGGCCGGGT CGCCGGGGCC GCCTCGTCGT TCGTCGGCTT TTACTCCACC GCCGCCAGCG CCTTTCTGGG ATGGGCGGTC GGCCAGCAGT TCGACGACAG CGTCCGGCCG CTGATGATGG GCTTCGCCGG CTTTGGCATT CTCGCCCTGG TCTGCGTGCT GGTCACCGAG CGCGGCCGGC TGTTCCGTCG CGCCGCCGCC TAA
|
Protein sequence | MPQLSPPTDR HREIGFPEFV GLMAMLMALT ALSIDVMLVA LADISSDYFL ADANDRQLVI TAYLLGFAVG QPVWGPLSDR IGRKPVLIAG LVIYGLGCLG AMVSPSFETL LAARLVQGLG GASPRVMTMA VVRDRYAGSG MARVMSLLMM IFIIVPILAP TMGSAVMAFA PWHWLFGFMM VFDLIVLVWT LTRLRETHRP QRQLAPSLGG LLETLRVVVS NRQTVGYTVA FGFMMGSLMG YVGTAQQVFV EVYHEVELFP ILFGAIASAI AAASIINARF VTRIGSRRMS HAALLGFVAV GLVTAAFGFP AKPPLALFMA ALGIQFFCFG LIGPNFNAMA MEPMGRVAGA ASSFVGFYST AASAFLGWAV GQQFDDSVRP LMMGFAGFGI LALVCVLVTE RGRLFRRAAA
|
| |