| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2935 |
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| Symbol | |
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| ID | 3836379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3380587 |
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| End bp | 3383040 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827050 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_428019 |
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| Protein GI | 83594267 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATG GACTGGCGGA CTCGACGGGG TGGATCGCAG GCGGCGTCGG GGATGGCGCC
CAGATAGCCC TGTGGGTTCT GGGAGGCGGC TTCCTGGCCG GGGCCTGGGC GTGGTCCCTG
CGCCTGGCCT GCCGCAGGGG CGAGCGTTTG GCCCGGGCCC GCGGGCCGCA TCTGCTTGAT
AACCTCGATG AAGCGGTGGT GGTGACCGGG GGCGATGGGC GGGTGGCCTA TCGGAACCGG
GCGGCGGCAA GGCTGCTTGC CCACCTCGCG CCGACCGCCG GCAGCGAACC CTCGCTGGAT
GGCTTTTGGG AAAAGGCCCT GCCTTTGCGC CCGGCGCGGA CCACCGACGG GCTGGTCGTC
GAGCGGCGGT TGATCGAAGG AGGCAGCCTT GACCAGGGGG TCTGTCTTCT GGCGATTCGC
CAAAGCCTGC CGCCGGGCGC TTTCACCCTC GACCCGGCCG AGGCGGGGAA CGCCGCCGGC
CTGTCGGGGC TGACCCTATG GACCTTGCTT GATGTGTCGC ATTGGCGGCG GCTTGACCAG
ACGGTTACCG AGCGCGAGGC CCGGCTGAGC GCCGTGCTCA ATGCCATCGA CGAATCGATC
ATGCGCATCG AGCCCGATGG CCGTATCGGC TTTATCAATA CCGCCGGAAC CGTGATCCTC
GGGGTGGCGC GCGATCAGGT GATCGGTCAG CCGCTGGCCG CCTTCTCGCC ACCGGCGGTG
GCCTGGGTCC GCCAGACCCG GGTGCGCGAG GTGATCGATG GCGGCAAGGC GGTGCGCTTC
GTCGATCGCA GCGGCGATCG GTGGCGCGAG CACACCTTTT CCCCAATCCC GGATGGCGAG
GGGCGAACCG TGGCCATCGC CGCCTGTTCG CGCGATGTCA CCGCCGAAAA GCGGGTTCAT
CAGGAGTTAT GCCGACGCGA GCAGTTCATT CGGCTGATCA CCGACAACCT GCCCGGCGTC
GTCTTCTATG TCGATGAGGC CGACACCTTC AAATTCGTCA ATCGCCGGGT GACCGACTGG
CTGGGCAAGC CGCCGACCGA TCTGCTGGGA CGGCCCTTCC GCGAGGGCGT CGATCCGCTG
CTCAATGAGG CCACCCTGGC CGGCCGCAAG GCGGCGCTGG CCGGGGAGCG GGTCGACTTC
GATTCCGAGT TCGTCGATCC CGATGGTCAC ACGCGGCGCT TCCAGGCGAC TTTCATCCCC
CACCTCGAAG GCGGCGAGGT TCTGGGGTAT GTCGGGCTGC TTCTTGACAC CACCAAGCGG
GTCGAAGTGG AAGCCGCCGT GCGCGACGCC CTGGCCCGGG CCGAGGCGGC CAGCACCTCG
AAATCCCGCT TTCTGGCCGC GGCCAGCCAC GATCTGCGCC AACCGATGCA GGCGCTCAAC
ATCTATGTCG GTCTGCTGAC CCGTCAGGTC CGCGAGCAGC CCCGCGCCTA TGAACTGGTG
CAACGGGTGG GGCAATCGGT CAATGCCCTG GGCGACCTGC TCGATTCGCT GCTCGATGTG
TCCAAGCTCG ATGCCGGCAT CGTCACCGCC GCCCCCCAGC CCTTCGCCGT GAACAATATC
CTTGAGCGCA TGGATACGGA GATGCGGCCG CTGTTCGAGG CCAAGGGCCT GCGTTTCCGG
GTCGTCAAAA GCGCGCTGAT GGCCTGTAGC GATGATACGC TGGTGGAACG GATCTTGCGC
AATCTTGTTA CCAACGCCTA CCGCTATACC CAGAGCGGCG GCGTGGTTCT GGGATGCCGG
CGACGGGGCG GGACCGTGGT TTTCCAGGTC TGGGACAGCG GCATCGGCAT TCCCGCCGAC
CGTCTGGATC TGATTTTTGA AGAATTCTAT CAGGTGGGCA ATCAGGGGCG CGACCGGGCC
CAGGGGCTGG GCCTGGGGCT GGCCATCGTC CGCAGGCTGT CGCAGTTGCT TGGTCATCCC
GTCGCGGTGC GCTCCGAGGT TGGCCGGGGA ACGATGTTCG AGGTGGCTTT GCCCCAGGCC
TCGCCCGAAG AGATGGAAGC GGCCGTGACC TCGTGGACGG CCACCGGCCT GCCGGCCATC
CGCGATGGCA CCCTGGCGGT GGTGATCGAC GATGACAGCG CCGTGCTCGA CGGCATGGCC
CTGCTGCTCG AGGACTGGGG CTTCGACGTG GTGGCCGCCC AGGACATGCT GGAAGCCTTC
GAGGCCTTGC GCGGGTCGCC AAAGGCGCCG GCGGTGATCA TCGCCGACTA TCGCCTTCAG
GCCGGGGGGA CCGGCGTGGC GGCGGTGCAA AGCCTGCGTC AGGCCTTTGG CGTGACCATC
CCCGGGGTGA TCGTCACCGG CGATACCTCG CCCGAGCGCC TGCGCGAGGT CACGGCCAGC
GGCTTTCGTT TGCTGCACAA GCCGGTGCGC ACCTTCGACC TGCGCGCCGC CCTGGCCGAG
GAAATGGGCG AGGACGCCCT GGAAGGGATT CCGCCCCAGC GCCGGGGCGC CTGA
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| Protein sequence | MINGLADSTG WIAGGVGDGA QIALWVLGGG FLAGAWAWSL RLACRRGERL ARARGPHLLD
NLDEAVVVTG GDGRVAYRNR AAARLLAHLA PTAGSEPSLD GFWEKALPLR PARTTDGLVV
ERRLIEGGSL DQGVCLLAIR QSLPPGAFTL DPAEAGNAAG LSGLTLWTLL DVSHWRRLDQ
TVTEREARLS AVLNAIDESI MRIEPDGRIG FINTAGTVIL GVARDQVIGQ PLAAFSPPAV
AWVRQTRVRE VIDGGKAVRF VDRSGDRWRE HTFSPIPDGE GRTVAIAACS RDVTAEKRVH
QELCRREQFI RLITDNLPGV VFYVDEADTF KFVNRRVTDW LGKPPTDLLG RPFREGVDPL
LNEATLAGRK AALAGERVDF DSEFVDPDGH TRRFQATFIP HLEGGEVLGY VGLLLDTTKR
VEVEAAVRDA LARAEAASTS KSRFLAAASH DLRQPMQALN IYVGLLTRQV REQPRAYELV
QRVGQSVNAL GDLLDSLLDV SKLDAGIVTA APQPFAVNNI LERMDTEMRP LFEAKGLRFR
VVKSALMACS DDTLVERILR NLVTNAYRYT QSGGVVLGCR RRGGTVVFQV WDSGIGIPAD
RLDLIFEEFY QVGNQGRDRA QGLGLGLAIV RRLSQLLGHP VAVRSEVGRG TMFEVALPQA
SPEEMEAAVT SWTATGLPAI RDGTLAVVID DDSAVLDGMA LLLEDWGFDV VAAQDMLEAF
EALRGSPKAP AVIIADYRLQ AGGTGVAAVQ SLRQAFGVTI PGVIVTGDTS PERLREVTAS
GFRLLHKPVR TFDLRAALAE EMGEDALEGI PPQRRGA
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