| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2852 |
|---|
| Symbol | |
|---|
| ID | 3836292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3281526 |
|---|
| End bp | 3283709 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637826963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_427936 |
|---|
| Protein GI | 83594184 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1256] Flagellar hook-associated protein |
|---|
| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA ATCTCGCCCT GTCCGCCGGA ATCAGTGGAC TTCAGACAGC CCAGAAAGGG
CTCGATCTGG TTTCCCACAA TCTGGCGAAC ATCAACACGC CGGGCTATAC CCGGAAGATC
TTCAACCCGG AAAGCGTCGT CCTCAACGGC AGCGGCGTCG GTGTGCAGAC CGGCACGATC
GCCCGGCGCG TCGACGAGGG TCTCAACCGG GACCTGCGCG AAGAGCTGGC CAAATACACC
GAATACAAAA CCAAGGCGTC CTACTACCAG CGCATGCAGG ACCTGTTTGG CAAGCCGGCC
TCGAACAACT CGATCAGCCA TAACCTGACG GCCTTCGGTC AGCAGTTCGA TACCCTGGCG
CTCGAGACCG ACAAATCGAC CCAGCAGATG GCCACGGTGC GCTCGGCCCA GGAACTGACC
AGCCAGTTCA ACACCATCTC CACCCGTTTG CAGCAGATGC GCCTGACCGC CGATCAGGAT
ATCGCCGGCG CGGTGGCCGA GGTTAACGGC CACCTCAAGA ACATCGACAC CCTGAACGAC
GAGATCACCC TGGGGGTGGC CACCGGTCGC GACGTGACCG ATCTTCAGGA CAAGCGCGAC
CTTGAGGTTC AGCAACTGAC CGAACTGGTC GATGTCACGA CGTTTGAGCG CCCGGGCGGC
GCCCTGGTGG TTTATACCAA GGGCGGATCA ACCCTGCTCG ACGCCGATCC GATCCCCGTC
AGTTTCACCG CGTCCAGTTC GGTCACCGCC TGGGACAGCA AGGGCGGCGG CGATTTTTCG
GCGATCTCGG TCGGCGGCAG CGATATCACC GGCGAAATCG GCGCCGGCAA GCTGGCCGCC
CTGATCGACA TGCGCGACAA GACCGTCCCC GCCTATCAAT CGCAGATGGA CGAACTGGCC
GGCAAGTTCA GCGACTCGAT CAACCAGATC CACAACCGCG GCACCAGCCA GCCGACCATC
GCCAATTCCT ATTCCGGCAC CACCACCTTC ATCGCGCCGG CCACGCAAAC CATGGCCCTG
ACCACCGGCG ACGTGGCGAT TACGCTGTTT AACGCCGATG GCACCCAGAA GGCGACGACG
ACGCTGAAAA CGATCGTGCC GGCGGTGGCC ACCGGAGAGG ATATCTCGAC CGTGACCACG
GCGATCCAGA CCTGGCTCAA CTCGGGGACC GGCGGCGGCT TGACCGGGGC CACGGCCACG
GTCGACGCCA ATGGCAAGGT CCAGATCAAA CTCGGCACCA ACACCGCCTC GCTGGCCTTC
CGCGATCAGG CCTCGACCAC CGCCGGATCG ACGGCGGGCG ATGTGACCAT CGCCTATGAC
GCCGACGGCA ATGGCACGAC CGATCAGACC GTTTCGGGAT TCGCCAATTT CCTTGGCCTC
AACGACATGT TCGTCGCCAA TCGCGGGCAG TGGATGGCCG ACAGCGACGT CAAGGCCCAG
AACTGGACGC CCAATGTCGG CGGCGCCCTG ACCTTCTATG ATAGCAACAA TCCCCCCGGC
GGAACCGCCA TCGGCACGCT GACCATCGCC CCGAACGAAA CCCTCAAAGA CATCGCCCTC
AAGATCAATT CCGATACGGC GCTTTCGGCC AAGCTCGAAG CCGAGGTCGT GCAAGATGGC
GACGGCTATC GCCTGCGCAT CAAGGATCGC GCCGGCAAGG ATATGGTCAT CACCCAGACC
GCCGGCGTCG GCACCGGGCT GATCGAACAA TTGGGCCTGA AGGATTCGAA GGCCGGGCTG
TCGGGCCAGT TGCGCGTCAA CCAAAGCCTG CTAGATGATT CGTCGCGCAT CTCGCGCGGC
GCCGTGCTCT TCAATTCCGA CACCGGCCAG TACTATATCA GTGCGGGCGA CAACACGACG
GCCAACCAAT TGGCCAAATC CTTCCAAACG GCGGTCTCTT TCGACGCCGC CGGCGGGGTG
ACGACGGGGG CGCGCAGTTT CTCGGACTAT GCGGCCCTGA CGCTCAGCCA GAACGCCAGC
GAAGCCAGTG CGGTGGCCAC CACTGTCAGC TACCAAAGCC AACTCGCCGA TACCTTGCAA
CTGAAGTCGG CCGAAATCAG CGCCGTCAAT ATGGACGAGG AACTCTCTCA ACTCCTGGTC
TGGGAACAGA TGTACCGGGC TTCGGCCAAA GTCATCTCGG CCGCCGCCGA CATGCTCGAC
GTGCTCAACA GCATCATCCG TTAA
|
|---|
| Protein sequence | MSLNLALSAG ISGLQTAQKG LDLVSHNLAN INTPGYTRKI FNPESVVLNG SGVGVQTGTI
ARRVDEGLNR DLREELAKYT EYKTKASYYQ RMQDLFGKPA SNNSISHNLT AFGQQFDTLA
LETDKSTQQM ATVRSAQELT SQFNTISTRL QQMRLTADQD IAGAVAEVNG HLKNIDTLND
EITLGVATGR DVTDLQDKRD LEVQQLTELV DVTTFERPGG ALVVYTKGGS TLLDADPIPV
SFTASSSVTA WDSKGGGDFS AISVGGSDIT GEIGAGKLAA LIDMRDKTVP AYQSQMDELA
GKFSDSINQI HNRGTSQPTI ANSYSGTTTF IAPATQTMAL TTGDVAITLF NADGTQKATT
TLKTIVPAVA TGEDISTVTT AIQTWLNSGT GGGLTGATAT VDANGKVQIK LGTNTASLAF
RDQASTTAGS TAGDVTIAYD ADGNGTTDQT VSGFANFLGL NDMFVANRGQ WMADSDVKAQ
NWTPNVGGAL TFYDSNNPPG GTAIGTLTIA PNETLKDIAL KINSDTALSA KLEAEVVQDG
DGYRLRIKDR AGKDMVITQT AGVGTGLIEQ LGLKDSKAGL SGQLRVNQSL LDDSSRISRG
AVLFNSDTGQ YYISAGDNTT ANQLAKSFQT AVSFDAAGGV TTGARSFSDY AALTLSQNAS
EASAVATTVS YQSQLADTLQ LKSAEISAVN MDEELSQLLV WEQMYRASAK VISAAADMLD
VLNSIIR
|
|---|
| |