| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2789 |
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| Symbol | |
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| ID | 3836229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3223449 |
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| End bp | 3225155 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637826900 |
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| Product | major facilitator superfamily protein MFS_1 |
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| Protein accession | YP_427873 |
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| Protein GI | 83594121 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins
[COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCGT CTTCCGCCGG TGCCGCCGCC GGCGCCCCCT CGCTGTTTCG CCAGCCCAAG
GCGGTGTGGG CGACCGCCTT CGCCGCGGTG ATCGGTTTCA CCAGCATCGG ACTGGTCGAC
CCGATCCTGA CCTCGATCGC CGAGGGGCTG AGCGCCACGC CCAGTCAGGT CTCGCTGTTG
TTCACCAGCT ATTTCTTCGT CACCGCCGTG ATGATGCTGG TCACCGGCTT CGTCTCCAGC
CGCATCGGCG GGCGCAACAC CTTATTGCTT GGCGCCCTGC TAATCGCCGT CTTCGCCGCC
CTGGCCGGCA CCTCCGACTC GGTGGCCGAA CTGGTCGCTT ATCGGGCGGG ATGGGGCTTG
GGCAACGCCT TTTTCGTCGT CACCGCGCTG TCGGTGATCG TCGGCGCCGC TTCGGGCGGC
ACGGCCGGGG CGATCTTGCT TTATGAGGCC GCCTTGGGCT TGGGCATCTC GGCCGGACCG
TTGATCGGCG CGGCGCTCGG CGCCCATTCC TGGCGCTATC CGTTCTTCGG CACGGCGGCG
CTGATGACCA TCGGCTTCCT GGCCATCGCC GTGTTCCTTG ATCCCCAGCC CAAGCCGGCG
CGCAAGATCG GCTTGTCGGG GCCTGTGAAG GCCTTGCGCC ATCCCGGCTT GCTGACGACC
TCGGTCAGCG CCTTTTTCTA TTACTACGCC TTCTTCACCG TGCTGGCCTT CGCGCCCTTC
GTGCTGCGAC TGTCGGCCCA TGCCATCGGC CTGATCTTCT TTGGCTGGGG GGTGGCGCTG
GCCCTGTTCT CGGTGCTGGT CGCCCCCCGT TTGCAGGCGC GCTTTGGCGC CTTCGCCCTG
CTTGCCGTCA GTCTGGTCGG CTTCGCCCTG CTGCTCTGCG TCATGGCCTT CGGCACGATC
CCGATGATCG TGACCGCCGT CGTCGCCTCG GGGGCGCTGA TGGGCGTCAA TAACACCGTC
TATACGGAAA TGGCGCTGGA GGTTTCCGAG CAGCCGCGCC CGGTGGCTTC GGCGGCCTAT
AATTTCCTGC GCTGGTTCGC CGGCGTCATC GCCCCTTATG CCGCCTCGCG CCTGGGCGAG
AGCTCCGGTC CGGCCAGCGC CTTCCTGACG GCGGCGGGCG CCGCGCTGAT CGGTGGGGCG
ATCCTGGTGG CGCTGCGGCG CAATTTGGGC CGCTACGGCC AGACGCGCCA GGACGCAATC
CCGCCGACCG TCCCGTCGAT CGGGCCGATT CTGGTCGGGC TTGATGGTTC GGCCGCCGAT
CGGGCGGTGC TGGCGCGGGC GGTTACCCTG GCGCGCCAGG GCGGCGGGGC GGTGTTCGTG
CTGCACATTC GCCCGATCGA GGTGTTTGGC GAATTCGCCG CCGCCCTGGA AGACCGCGCC
GCCGGCCGGG CGGTTGTCGA GAACGCCGTG GCAAGCCTCG GCGCCCAGGG GATCACCGCC
ATGGGCGAGG TGCTCGAGGA ATCGTCCACC CTGGTCCCCC AGCGGGTCAT CGCCCGCGCC
CGGGCCCTGG CCGCCCGGGT GATCGTGCTG GGCACCCGCC ATCCCGGCGA TCTTGGCAAT
CTGTTGCACG GCTCGGTGGC CGATATCGTC GGCCGCGAGG CCGGACGGCT GGTCGAACTG
GTTCCGAGTT CGGCGGGGGA AGGCGAGGCC GGGGAGACTG CCTTAGAACC CCGGGCGCTC
GCCGCCACGC CAGGACACCG GGTTTAG
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| Protein sequence | MSSSSAGAAA GAPSLFRQPK AVWATAFAAV IGFTSIGLVD PILTSIAEGL SATPSQVSLL
FTSYFFVTAV MMLVTGFVSS RIGGRNTLLL GALLIAVFAA LAGTSDSVAE LVAYRAGWGL
GNAFFVVTAL SVIVGAASGG TAGAILLYEA ALGLGISAGP LIGAALGAHS WRYPFFGTAA
LMTIGFLAIA VFLDPQPKPA RKIGLSGPVK ALRHPGLLTT SVSAFFYYYA FFTVLAFAPF
VLRLSAHAIG LIFFGWGVAL ALFSVLVAPR LQARFGAFAL LAVSLVGFAL LLCVMAFGTI
PMIVTAVVAS GALMGVNNTV YTEMALEVSE QPRPVASAAY NFLRWFAGVI APYAASRLGE
SSGPASAFLT AAGAALIGGA ILVALRRNLG RYGQTRQDAI PPTVPSIGPI LVGLDGSAAD
RAVLARAVTL ARQGGGAVFV LHIRPIEVFG EFAAALEDRA AGRAVVENAV ASLGAQGITA
MGEVLEESST LVPQRVIARA RALAARVIVL GTRHPGDLGN LLHGSVADIV GREAGRLVEL
VPSSAGEGEA GETALEPRAL AATPGHRV
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