Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2671 |
Symbol | rpsE |
ID | 3836106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3099629 |
End bp | 3100228 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826777 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_427755 |
Protein GI | 83594003 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.390109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACGTA CACCCAACAC GGATCGTCGC CAGCGCGGCG GCGACGACCA GCGCAACCGG TCTCCCCGGA GCGATGAGCG CGACGAGGAG TTCCTCGACA AGCTCGTTCA CATCAATCGC GTCGCCAAGG TGGTCAAGGG CGGTCGGCGT TTCGCCTTCG CCGCCCTGGT TGTCGTCGGT GACGGCAAGG GCCGCGTCGG CTTCGGGACC GGTAAGGCCC GCGAAGTTCC CGAGGCGATC CGCAAGGCGA CCGACCAGGC CAAGCGCACC ATGATTAAGG TGCCGCTGCG CGAGGGTCGG ACGCTTCACC ACGACACCAA CGGCCATTTC GGCGCCGGCT GGGTGACCCT GCGTTCGGCT CCGGCCGGTA CGGGCATCAT CTCGGGCGGT CCGATGCGCG CGGTCTTCGA GACCATGGGC GTCCAGGACG TGGTTGGCAA ATGCACGGGA ACCACCAACC CGTACAACAT GATCAAGGCG ACCTTCGATG CCCTGGTCAA CAGCCAGGCT CCCCGTCAGG TCGCGGCGCG CCGCGGCAAG AAGGTGGGCG ACATCGTGGC TCGCCGTGAT GGCGCGGCCG CCGCTGGCGC CACCGAGTAG
|
Protein sequence | MARTPNTDRR QRGGDDQRNR SPRSDERDEE FLDKLVHINR VAKVVKGGRR FAFAALVVVG DGKGRVGFGT GKAREVPEAI RKATDQAKRT MIKVPLREGR TLHHDTNGHF GAGWVTLRSA PAGTGIISGG PMRAVFETMG VQDVVGKCTG TTNPYNMIKA TFDALVNSQA PRQVAARRGK KVGDIVARRD GAAAAGATE
|
| |