Gene Rru_A2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2154 
Symbol 
ID3835581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2502214 
End bp2502681 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID637826256 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_427241 
Protein GI83593489 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.8914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGG CGCTTCTTCC CTCGGGGGAT GACGAGGGCG GCTACAAGCC GATCGCCGAG 
ATCAACATCA CGCCGATGGT CGACGTGATG CTGGTGCTGC TGATCATCTT CATGGTCGCC
GCCCCCCTGA TGTCGATGGG GGTGCCCGTC GATCTGCCGC GCACCCAGGC GGCCGAGGCC
CAGCCGCCCA AGGATCCGGT GGTGGTCAGC ATCGACCAGA CCGGCGCCCT GTTCCTGCGC
GACCAGCCGC TGGCCGAGGC CGATATGGAC GCCCGGCTGG CCGCCCTGGC CAAGGAAAAG
CCCGGTTCGG TGGTTTATGT GCGCGGCCAC AAGGATCTGC CCTATGGACG GGTGATGGAG
GTGATGGGGC GGATCGGTCA GGCCGGCTTC GCCAAGGTCT CGCTGATGGC CGAAATGCCC
ACGCCGCCAG CCGCCGCCGG GGCCGCCGCC ACGGGAACGG GCCGGTGA
 
Protein sequence
MAGALLPSGD DEGGYKPIAE INITPMVDVM LVLLIIFMVA APLMSMGVPV DLPRTQAAEA 
QPPKDPVVVS IDQTGALFLR DQPLAEADMD ARLAALAKEK PGSVVYVRGH KDLPYGRVME
VMGRIGQAGF AKVSLMAEMP TPPAAAGAAA TGTGR