| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2065 |
|---|
| Symbol | |
|---|
| ID | 3835491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2388620 |
|---|
| End bp | 2389621 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826166 |
|---|
| Product | hydroxyproline-2-epimerase |
|---|
| Protein accession | YP_427152 |
|---|
| Protein GI | 83593400 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.012514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTC ATACTTTTTC GTGCATCGAT GCCCATACCT GCGGCAATCC GGTGCGTCTG
GTCTCGGGCG GCGCGCCCCT GCTCACGGGG GCGACGATGA TGGAGCGCCG GGCCCATTTC
CTGCGTGAGT ACGACTGGAT CCGCACCGGT TTGATGTTCG AGCCACGCGG CCACGACGCC
ATGTCGGGCA GCATCTTGTA TCCGCCGACC CGCGCCGATT GCGACATCGC CATTCTCTTC
ATCGAGACCA GCGGCTGCCT GCCGATGTGT GGTCACGGCA CCATCGGCAC GGTCACCGTC
GCCCTGGAAC ACGGCCTTGT CCGCCCACGC GAGCCCGGCC TGCTGCGTCT GGACACCCCC
GCCGGGGTGG TCGAGGCGCG CTATACCCAG CAAGGCGACA AGATCACCTC GGTGCGCCTG
CGCAATGTGC CGGCCTATCT GCATGGCACC GGCTATCAGG TGGAGGTTCC CGGCCTGGGG
CCGCTGACTT TCGATATCGC CTATGGCGGC AATTTCTACG CCATCATCGA GCCCCAGCCC
GGCTATGCCG ATCTCGACGC CTTGTCGGTG ATGGATATCC AAAGCTTCAG CCCGAAGATC
CGCGCCCTGG TCAACGAGCG CTATGAGATC ATCCACAAGG CCGATCCGCG CCTGCGCGGC
CTCAGCCATG TGATGTGGAC GGGCAAGCCC CGCGATGCCC TGGCCCAGGG GCGCAACGCC
GTTTTCTATG GCGAGCGCGG CGTCGATCGC AGCCCCTGCG GCACCGGCAC CTCGGCCCGC
ATGGCCCAAT TGGCGGCGCG CGGGGCTCTG GCGCCCGGCG ACGCCTTCGT CCACGAAAGC
ATCATCGGCA GCCTGTTCCA TGGCCGGGTC GAAGAGGCGA CCACCGTTGG CGATAGCCCG
GCGATCATCC CCAGCGTCGA AGGCAGCGCC TGGGTCACCG GCCTCAATAC CCTCTTCCTT
TATGACGAAG AGCCCTATTC GCAGGGCTTC CTGCTGCCCT GA
|
|---|
| Protein sequence | MARHTFSCID AHTCGNPVRL VSGGAPLLTG ATMMERRAHF LREYDWIRTG LMFEPRGHDA
MSGSILYPPT RADCDIAILF IETSGCLPMC GHGTIGTVTV ALEHGLVRPR EPGLLRLDTP
AGVVEARYTQ QGDKITSVRL RNVPAYLHGT GYQVEVPGLG PLTFDIAYGG NFYAIIEPQP
GYADLDALSV MDIQSFSPKI RALVNERYEI IHKADPRLRG LSHVMWTGKP RDALAQGRNA
VFYGERGVDR SPCGTGTSAR MAQLAARGAL APGDAFVHES IIGSLFHGRV EEATTVGDSP
AIIPSVEGSA WVTGLNTLFL YDEEPYSQGF LLP
|
|---|
| |