Gene Rru_A2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2023 
Symbol 
ID3835449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2335348 
End bp2337819 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content64% 
IMG OID637826124 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_427110 
Protein GI83593358 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0346871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAC TCCATTCCAT TCAGATGAAG ATCTCAGGCC TGTCGGGGGC CTGCCTGATC 
ATCGCCGCCG CCACTTTGAT TTCTTTTTCC ATTTACTCGT CGAAAACCAC CCAGACCTAT
GTCGGCGAGC GCACCGGCGC GCTGAGCCTC GCCAATGCCG AGGATATCTT GCGCAATCTG
GCGACCACCC AGGCCGCCTC GATCAAGGCG ACGCTGAACG GCGCTTTTGA TGCCGCGCGC
ACCACCGCCA ACACCTTCGG CGCCCTGGAA GACGGCCCCA ACAACAGCCC CGATCAGGCC
CGGGCGCAAC GTCAGGCGTT CAACGCCATC TTGTTGAACG TCTTGAAGGA CAATCCGGAA
TTCAACGGCA CTTATTCGGC TTGGCAGCCT GATGGGCTTG ATGGCCAAGA CGCCCTGTTC
GTTGACGGCA CGGCGACCGG ATCGGACAAG ACCGGGCGAT TTTTGCCCTA TTGGACGCGC
GGCGCCGATG GCACCCTGGC CATCCAGCCC TTGGTCGAAT ACGACAGCGA GGCCCGCCAT
CCCAATGGCA TCGTCAAGGG GGCGTGGTAT CTGGGGCCGC AGCGCACCGG CAAGGAAAGC
ATCGTTGGGC CGCTGCCCTA TATCGTTCAG GGCAAGCCGG TTTTTCTCGC CACCATGTCG
GTTCCCGTCG TCGTCGGCGG GGTTTTCCAA GGCGTCGCCG GGGCGGATTA CGATCTGTCT
TTTGTGCAGA AGCTGGCGGT CAGCGTCTCG GCCTCGCTCT TTGACGATCA TAACGATGTG
ATGATCGTCA ATGGCGACGG CTTGGTCGTC GCCCACAGCA AATACCCGCA ATCGATCGGC
AAGCCGCTGG GCGAGAACGA TCCCGATGCG GCGGCGCTCT TCCCCAAGTT CGATCCGACC
AAGGCGGTGA CTGTTGACGA TGGAGCGACC AAATCGCTGG TCGCCATGGC GCCGATCGCC
ATGGGCCGCA CGGGAACCTC GTGGGCGGTG GTCATCCGCG TGCCACGCGC CGTCGTGCTT
GAACAAGCCA TCGCCCTTGA AACCGAGATC CAGAGCCGCA CCAACGATAC CATCAGCACC
CAGCTTGGCG TTGGCGTCGT CGTCGCCATT CTTGGCATCG GGCTGGTCTG GCTGTCGGCG
GGCGGCATCT CGCGGCCTTT GGTGCGCGTC GCCCAGGCGA TCTCCCAGAT CTCCGGGGGC
AAGACCGACA TTACGATCGT CGGCCTGACC CGCAAGGACG AGTTGGGCAC CATGGCGCGG
GCGACCGACG CCCTGCGCAC CTCGGTCGAC GAGGCCTTCA AGCTCAAGCA GATGGTCGAG
CTGCAGCCCA CCCCCACCCT GCTCTGCCAT CCCGCCGATC TGACCATTAC CTATATGAAC
GCCGCCGGGC GGACGCTGCT TGATCATGTT CTCAAGGGAC GCGGCCTGTC GGCGGCCCAG
GCGATGGGCC ACCCGGCCAA CGAGTTCCAC CCGTCGCCGG GCGAAATGCG CCGCCGCGCC
ACCACCCCGT CGGCCATGCC CTTCAAAGAG CGCTTCACCC TTGATGGCGT GATCATCGAA
AGCAACGTCA CCCCGATCTT CGATCAGGGC GGGGCCTTCC TCGGGCCGAT GTTGAACTGG
ACCGACGTCA CGCGCTATGT GCGCATGGCC GATGATTTCG AAGGCAAGGT GCGCTCGGTG
GCCTCGGCCG TCAGCGACTC GGCGCAGAAA CTGTCCCATG ATTCCGAAGA CATGCGCCGC
ATCTCCGAGG GCGTCAGCCA GAAAAGCTCA AACGTCGCCG CGGCATCGGA GGAAATGGGC
ATCAACATGC AGACGGTGGC GGCGGCGACC AACGAACTGA CCGCCTCGCA AGGCGAAATC
GCCCGCACCA TCTCGCTCAC CGCCAATGGG GCGACCAAGG CCGCCGAATC GGTGACGACG
GCGGTGGACC GGGTGCGCGG CCTGGAAAAA GCCGCCGCCG ATATCGGCGC GGTGATCGCC
CTGATCACCG ACATCGCCAG CCAGACCAAT CTGCTGGCCC TCAACGCCAC CATCGAGGCG
GCACGGGCGG GAGAAGCCGG CAAGGGCTTC GCCGTGGTCG CCGGCGAGGT CAAGGCCCTG
GCCAATCAAA CGGCGCGGGC CACCGATACC ATCCGGGCGA CGGTGGTCGA TATGCAGCAA
TGGATGGGTC AGGCCGTGGA CTCGATCACC GAAGTCAATG ACATCGTCAT CGGCATGCGC
GAACAGGCCT CGGGCGCGGC GGCGGCCACC GAACAGCAAA CCTCGGCCAC CTCGGAAATC
ACCCGCAACG TCGAACAGGC CTCGATCGCC TCGCGCGAGG TCGGCCTGCA TATCGGTTCG
GTCGCCAGCG AAGCCATGCA GGCCCTTGAA AACACCCAGG GCATCAAAGC CGCCGCCGAC
GACCTGTCGG CCTCGGCCCG CCAGTTGGAA AAGGAGGTCG ACGGCTTCCT CAGCCACCTG
CGCGAGGTAT AG
 
Protein sequence
MIKLHSIQMK ISGLSGACLI IAAATLISFS IYSSKTTQTY VGERTGALSL ANAEDILRNL 
ATTQAASIKA TLNGAFDAAR TTANTFGALE DGPNNSPDQA RAQRQAFNAI LLNVLKDNPE
FNGTYSAWQP DGLDGQDALF VDGTATGSDK TGRFLPYWTR GADGTLAIQP LVEYDSEARH
PNGIVKGAWY LGPQRTGKES IVGPLPYIVQ GKPVFLATMS VPVVVGGVFQ GVAGADYDLS
FVQKLAVSVS ASLFDDHNDV MIVNGDGLVV AHSKYPQSIG KPLGENDPDA AALFPKFDPT
KAVTVDDGAT KSLVAMAPIA MGRTGTSWAV VIRVPRAVVL EQAIALETEI QSRTNDTIST
QLGVGVVVAI LGIGLVWLSA GGISRPLVRV AQAISQISGG KTDITIVGLT RKDELGTMAR
ATDALRTSVD EAFKLKQMVE LQPTPTLLCH PADLTITYMN AAGRTLLDHV LKGRGLSAAQ
AMGHPANEFH PSPGEMRRRA TTPSAMPFKE RFTLDGVIIE SNVTPIFDQG GAFLGPMLNW
TDVTRYVRMA DDFEGKVRSV ASAVSDSAQK LSHDSEDMRR ISEGVSQKSS NVAAASEEMG
INMQTVAAAT NELTASQGEI ARTISLTANG ATKAAESVTT AVDRVRGLEK AAADIGAVIA
LITDIASQTN LLALNATIEA ARAGEAGKGF AVVAGEVKAL ANQTARATDT IRATVVDMQQ
WMGQAVDSIT EVNDIVIGMR EQASGAAAAT EQQTSATSEI TRNVEQASIA SREVGLHIGS
VASEAMQALE NTQGIKAAAD DLSASARQLE KEVDGFLSHL REV