Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2004 |
Symbol | |
ID | 3835429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2315101 |
End bp | 2316015 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637826104 |
Product | LysR family transcriptional regulator |
Protein accession | YP_427091 |
Protein GI | 83593339 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGC GGCAGATGCG CTATTTCCTG GCCGTGGTCG ACGCCGGGTC GTTTTCCGCC GCCGCCCGCG CCCTGCGCGT CGCCCAGCCG GCGCTGTCGC AAAGCCTGAA GCGGCTGGAA GACGAGGTCG GCGCCGCCCT GCTTCACCGC CTGCCGCGCG GCACCCTGCC CACCGAGGAG GGCCTGCTTC TGGCGGCCGA GGGGCGGCGG TTGCTTGCCG AGTGGGATGG CCTGGGCGGC CTGTTGCGCG CCCGGCGTGA CGATCCAGCC GGCGATCTGG CGATCGGCAT CCCAACCTCG CTGGGGCCGG TGGTCAGTCT GGCCGTCGCC CGGCTGGTCG CCCGGCGATT GCCCAAGGTG CGGTTGCGGC TGATCGAGGG GCTGTCGGGC CATATCATGG GCTGGCTGCG CGACGGCACG CTCGATCTGG GGCTGGTGTT CAATGGCGAG ACCGGCGGCG ACCTTGGCGT CGAGCCTTTG GCCAGCGAAT GTCTGGCGCT GATCGCCCCG GCGGCCAGTT CGCTGCCCAC GCCGATCCCC CTCAACGCGG CGGCGGCGTT GCCGCTGATC CTGCCCGGCC CGCCGCACGG TCTGCGCGAC GAGGTGGAGC GCGCCTTCGC CAGTCGCGGG CTGGTCGCCA AGGTTTGCCT GGAGATCGAC GCCCTTGATC CGATCAACAC CCTGGTCGCC GAGGGCTTTG GCTATTCCAT CTTGTCGCCG CGCGTCGCCC TGCAATCGAC GGGGGCGGCG CTGGTGCGGG TGATCCCGAT CATCGATCCG CCGATCACCC GCAGGATCGG CCTGGCCCAG GCCCGCCTGC GCCCGCCCAG CATCGCCCTG CGCCACGCCC TGCCGTTGCT GCGGCCGCTG ATCGGCCGGC TGGTGCGCGA CGGCGCCGGG GTCGGGCTAG AATAA
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Protein sequence | MDLRQMRYFL AVVDAGSFSA AARALRVAQP ALSQSLKRLE DEVGAALLHR LPRGTLPTEE GLLLAAEGRR LLAEWDGLGG LLRARRDDPA GDLAIGIPTS LGPVVSLAVA RLVARRLPKV RLRLIEGLSG HIMGWLRDGT LDLGLVFNGE TGGDLGVEPL ASECLALIAP AASSLPTPIP LNAAAALPLI LPGPPHGLRD EVERAFASRG LVAKVCLEID ALDPINTLVA EGFGYSILSP RVALQSTGAA LVRVIPIIDP PITRRIGLAQ ARLRPPSIAL RHALPLLRPL IGRLVRDGAG VGLE
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