Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1660 |
Symbol | |
ID | 3835079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1952389 |
End bp | 1953435 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637825754 |
Product | peptidase M23B |
Protein accession | YP_426747 |
Protein GI | 83592995 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.190766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGC GTTACAAGGG CGGGCGCGGC GCGTCCCGGC ATCGGCTGGC GATGGGGGTT TGGGCGGTCT TGGCCGGGGC GTTGATCGTC GTGGGCTGGC CTTGGTCCGC CCTGGCCGAC GGACCGCCCC GGCTTGGGCT GCCCATCGAC TGCAGCCCCG GGCGGACCTG CTGGATCACC AGTTATGTCG ATACCGATCC CGGCCCCGAG GCCCGCGATC AGGCCTGCGG CATCGTGACC TATAACGGCC ACGACGGCAC CGATTTCGGC ATCGGCACGA TGACCGAGCA GACCGATGTC GCCGTGCTCG CCGCCGCGGC TGGAACCGTC TTGCGCATCC GCGACGGCAT GGCCGATATC AACCGCCGGC TTCCCGAGGC GGCGTCCGTC GAAGGGCGGG AATGCGGCAA TGGCGTGGTT CTTGATCATG GCGATGGCTG GACGACCCAA TACTGCCATC TGCGCAAAGG CTCCATCGCC GTGAAGGCGG GACAAAAGAT CCCGGTCGGC CAACGCCTGG GGGCGGTGGG CCTATCGGGG AATACGGAAC ACCCCCATCT CCATATGACG GTGCGCCGCG GCACCACCGT TTTCGATCCC TTCAAGGGCC GGTCGGCCGC CCAGGGGTGC AAGGGCGGCG CCCTGCCGCT GTGGTCGCCG GTGGCGATGG CGGCTTTGCA CTATCAGCCG ATCGTTCTTT ACAATGTCGG CTTCGCCGGC GAAGAGCCCG ATCGCCTGCG GGTGCGGGCC GGCGGCTATG GCCAGACCAT CGCCGCCAAG GCGCCGATGC TGGTCGCCTA TGCCGATATC ATCGGCGTGG CCAAGAACGA TCGCCTGCGC CTGGAGATCA TCGGCCCCGA CGGCCGACCC TTCGCCCGAT CGGACCGGGT TTTCGATGAA AAGGGCTGGG TGCAGTGGTT CGGTTACGCC GGCAAGCGTC TGGCCTCGGG CGAATGGGCC AAGGGAGTTT ATACGGCGAT CGTCACCGTC GACCGTCCGG GCAAGGGGGT GATCGGTCTG CGCGACAGCC GGGCCACCGT GCGCTGA
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Protein sequence | MAERYKGGRG ASRHRLAMGV WAVLAGALIV VGWPWSALAD GPPRLGLPID CSPGRTCWIT SYVDTDPGPE ARDQACGIVT YNGHDGTDFG IGTMTEQTDV AVLAAAAGTV LRIRDGMADI NRRLPEAASV EGRECGNGVV LDHGDGWTTQ YCHLRKGSIA VKAGQKIPVG QRLGAVGLSG NTEHPHLHMT VRRGTTVFDP FKGRSAAQGC KGGALPLWSP VAMAALHYQP IVLYNVGFAG EEPDRLRVRA GGYGQTIAAK APMLVAYADI IGVAKNDRLR LEIIGPDGRP FARSDRVFDE KGWVQWFGYA GKRLASGEWA KGVYTAIVTV DRPGKGVIGL RDSRATVR
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