Gene Rru_A1533 details

Gene Information

• Locus tag: Rru_A1533
• ID: 3834948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1806345
• End bp: 1806890
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637825623
• Product: pentapeptide repeat-containing protein
• Protein accession: YP_426620
• Protein GI: 83592868
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGGAC CAACCGCGCC TTTACCCCCG GGTTTTCGTT CCGCCTCCCT GCGCCGCCTG 
TCGTTTTCAA TGGGGATTTT GCTGGGACTG GCGATCGGCG GTCCGGCCTT CGCCGGCTGT 
ACCGACGAAG CCGCCGCCGG GGTCGACTGG ACGCGCTGTT ACATGGACGA GCGGATTTTT 
GTGGGCGTGG ATCTGACCGG GGCCCGTCTG CGCGATGTCA CCTTCCAGCG CAGCGATCTG 
TCGGAGGCCA AGCTGGTGCG GGCGGCGGCC TATCGGGCGA AATTCGTCAG CGCCCGGCTG 
TCGCGGGCGG TGCTCGACGA GGGGAATTTC GGCGAGGCCG ACTTCTCGCG CGCCCGGCTT 
GACGGCGCGT CGCTGCGTGG CGCCGATCTG CGCCGCGCCC GCTTTTATGG CGCCGATCTG 
CGCAAGGCCG ATTTATCCGG GGCGCGGCTT CAGGGGGCGG ATTTCCTCGA GGCCAATCTG 
TCGGGTGCGG TGTGGACCGA GGGCGGCCGG ATCTGCGCCG AGGGATCGAT CGGGCAATGC 
AACTAA 

 

Protein sequence

MTGPTAPLPP GFRSASLRRL SFSMGILLGL AIGGPAFAGC TDEAAAGVDW TRCYMDERIF 
VGVDLTGARL RDVTFQRSDL SEAKLVRAAA YRAKFVSARL SRAVLDEGNF GEADFSRARL 
DGASLRGADL RRARFYGADL RKADLSGARL QGADFLEANL SGAVWTEGGR ICAEGSIGQC 
N