Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1044 |
Symbol | |
ID | 3833505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1236659 |
End bp | 1237168 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637825133 |
Product | peptide deformylase |
Protein accession | YP_426132 |
Protein GI | 83592380 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTTT TGGCGGGAAT CGCCCGACCG GTCGAAGATC CCACCGACCC AAAGATCCAC CGTCTGGTGG CCGATATGAT CGAGACCCTG GCCGACTCGG GTGGGGTCGG CCTTGCCGCG CCCCAGGTCC ATGTGCCCTT GCGGGTGATG ATCTTCCACG TTCCGGCCAA CCGCTCGACC GAGGCCGAGG GGGCGGTGCC GCTGACCGTT CTGATCAATC CGCAACTGAC GCCGCTGGGC GAAGAGATGG TCGAGGATTG GGAGGGCTGC CTGTCGCTGC CCGGGCTCAC CGGTCTGGTG CCCCGCTATC GGTCCTTGCG CTATCGCGGC GTCGATCTGG ACGGGCGGGA GGTCGAACGC GAAGCCCGCG ATTTCCATGC CCGGGTCGTT CAGCACGAAT ATGACCATCT TGACGGTGTG CTTTATCCGC GCCGTCTGCG CGATCCCAGC CAGTTCGGTT TCGTCGAAGA AATTCGCAAG GCGCTGGCGG CCAACCGCGA GCAGCCATAG
|
Protein sequence | MPVLAGIARP VEDPTDPKIH RLVADMIETL ADSGGVGLAA PQVHVPLRVM IFHVPANRST EAEGAVPLTV LINPQLTPLG EEMVEDWEGC LSLPGLTGLV PRYRSLRYRG VDLDGREVER EARDFHARVV QHEYDHLDGV LYPRRLRDPS QFGFVEEIRK ALAANREQP
|
| |