Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0840 |
Symbol | |
ID | 3834414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 999781 |
End bp | 1001100 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637824928 |
Product | major facilitator transporter |
Protein accession | YP_425928 |
Protein GI | 83592176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACGAA CCACGCTGGC CCACCGGTCC CGGACGACGT CGGGATACGC TTCATCCGTG CTGGGCTTGG TCCTTGCTGT CGGCGGCGTC TACGTCTCCC AGACCATGGT TTCCATGATC GCCATGCAAT CCCTGCCAAC CCTGCTTCGA GAGGCGGGGG TGCCGCTGGA ACTGCTCGGG ATGAGCGCGG TGTTCATGGT GCCTTGGGTG TTGAAGGTCT TGTGGGCTCC GGCCATCGAG CGGCTGCGGC TTCCCGCTGG TGATCCGCGC CGCCGCTCCA AGGCGATCAT CCTCTGCGGG CAGGGTTTGT TGGCGGCCGT CTTTGCTGGA CTGGCGTTTC TTCACTGGGG GGCATCGCTG GAAGGCTTTT TGAGCGTCGA TGTCTTCTTG GCCTTGATGG CAACCGCTGT GCTGGCCGCC AGTGTGGATG TGGCCAGCGA CGGCATGGTT GTGGATCATT TGGACGCGAA AACGCGCCCC TTGGGAAACG CCGCCCAGGT CGGTGGGGCG TATATCGGCC TCCTATTGGG GACCAGCCTG TTTCTTGTCA TCTGCGCCCG GTGGGGGCTG AGCGCGGCGT TGTTGTGCAC GAGTGCTCTG CTCGTTTTGC TGAGCGGTCC ACTGGTGGCC TTTCGGGAAC AGCGGCGGAG TCTGGCGGAA GCGGATCATC GTCCCAGCCT GGGGTTCGCA TTGCGGCGGC AGGAGGTCTG GGTTGGCATC ATGGCCATCA CCTGCCTGGA GGCCGGGGTG AGAACCGCGA CGGTGATGGT CGGTCCCTTG CTGATCGACC GCGGCGCCAG TCTGGAACTG ATCGGTTGGA TGTTCGGTGG CTTCACCGTC GTCGCCGGCT TGGCCGGAAC CGTCGCCGGT GCCTTGTTCG TGCGATGGCT GGGCGCCTGG AAGGCGGTCT TTCTGGCCTA TGGCATGCAG GCGCTGGTCT TGAGTGCTCT TGCCCTGGCG GCAGAGGCGG ATTTCCGGCT TCTCACCGTG CTGGTGGGGC TGAAGTTCAT GTTGATGGCC TGCGGGCTGC TGACCTCGTA CAGCGCCCTG ATGGGCCTGT CCTCGCCGAA ACAGGCGGGG GTCGATTTCA CGGTTTTCCA ATGCGCGAAT GCCCTGATCT CTTTGGTGGG CGGGGTGTTG GGGGGCTGGC TGGCCGGGAT CTGGGGGTAC GGCGCCTGTT TCGCGGTGGC GGCGGCCTTC GCCGGGATGT CGACGCTTGG CGTCGCCGCG CGCGTGCACG CCCTGGGCTA CTGGCACGGA TGGCGGGCGG AGCCCTCGGC GCGGTCCCCG GATCTGGACC TGAGGAGAGA AGAGATATGA
|
Protein sequence | MRRTTLAHRS RTTSGYASSV LGLVLAVGGV YVSQTMVSMI AMQSLPTLLR EAGVPLELLG MSAVFMVPWV LKVLWAPAIE RLRLPAGDPR RRSKAIILCG QGLLAAVFAG LAFLHWGASL EGFLSVDVFL ALMATAVLAA SVDVASDGMV VDHLDAKTRP LGNAAQVGGA YIGLLLGTSL FLVICARWGL SAALLCTSAL LVLLSGPLVA FREQRRSLAE ADHRPSLGFA LRRQEVWVGI MAITCLEAGV RTATVMVGPL LIDRGASLEL IGWMFGGFTV VAGLAGTVAG ALFVRWLGAW KAVFLAYGMQ ALVLSALALA AEADFRLLTV LVGLKFMLMA CGLLTSYSAL MGLSSPKQAG VDFTVFQCAN ALISLVGGVL GGWLAGIWGY GACFAVAAAF AGMSTLGVAA RVHALGYWHG WRAEPSARSP DLDLRREEI
|
| |