Gene Rru_A0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0726 
Symbol 
ID3834042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp854393 
End bp855799 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content69% 
IMG OID637824811 
Productmajor facilitator transporter 
Protein accessionYP_425817 
Protein GI83592065 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCC CCACCGGCCA CGCGGCGTCG GGCCATTTGT CGGCGGGCCG CCTTCTGGCC 
TATGCCCTGC CGGCTTTGGC CCTGGCCATC CCGACCATCC CGGCCTTCGT GCTGCTGCCG
GCCTTTTACG CCCAGGACCT GGGCTTGGGG CTGGCGGCGG TCGGCACGGC CATGGTCGTC
GCCCGGCTGT TTGATGGTCT TTGCGATCCG CTGATCGGCC TGATGTCGGA CCGCCACGCC
TTGCCCTGGC CGGGGGGGAA GCGGCGGCGC AAACCCTATG TTCTGGCCGG AGCCCTGCTG
GCCGGCCTGG GGCTGGTTCA ACTGTTTTCG CCGCCGGCCG AGCCGGGGAT CGGCTATCTG
CTGGGCTGGA GCATGGTGCT GTCCTTGGGT TGGACGCTGG TTTCGGTGCC TTATACCGCC
TGGGGCGCCG AATTGTCGGG CGATTACCAC GAGCGGGCGC GCATCACCGG CTGGCGCGAG
GGATTGGCCA TGGTCGGCGT GCTGGTCGCC GGGGCGGTGC CGGCCCTGGC CCTGGCCGCC
GGTCTGGACC GCGCCGGTGG GCTGGCCTGG GTCGCCTGGG CGGCCATTCT TCTCGGGGTG
CCGGGCCTTG CCCTGTTGCT GCTGCGCGTG CCCGAGGCTC CGCCGCCATC AAGCGCTCCG
CCGGCTTTGA GTTGGCGCGA TCTGCGCGCC CTGGCGGCCA ATGGTCCGTT TCTGCGGCTG
GTCGTCGCTT GGTTCCTGAA CGGCATGGCC ACCGGTCTGC CCGCCGCCCT GTTTCCGCTG
ATCGTCGACC ACCTGCTGCG CGGCTCCGAG GCGGCGCGCA ACGGGCTGAT CCTGGTTTAT
TTCCTGTCGG GCGTTGTTTT CATTCCGCTT TGGCTGGGAT TGGCCCGGCG CATCGGCAAG
CATCGGGCGT GGTGCGTGGC GATGATCGTG GCGATCGCCG CCTTTGTCTG GGTGCCGCTG
CTCGGCCCCG GCGATGTCCT GGCCTTTGGC GTGATCTGTG CCCTGACCGG CATGGCGCTC
GGCGCCGATC TGGCCCTGCC GCCGGCGATC CAGGCCGATG TCATCGATCT TGATCGCCTG
CGTACCGGTC AGCGCCGGGA GGGGTTGTTC TTCGCCCTGT GGGCGATGGC CCAGAAACTG
GCCCTGGCCC TGGCGGTGGG CATCGGCTTC TGGGGATTGG CCCTGGCCGG GTTCGAGACA
AGCGCAACCA CGCAATCCCC CCAGGCGTTA ACGGCTTTGG TGGTGATCTA TGCGCTGATC
CCGATAGGGT TGAAGGTCTG CGCCATCCTG GTTGTCTGGG GCCATCCCCT GACGCTCGGC
CGGCAAAAAG CGATCCGCCG CCTGCTTGAT CGCGCCGCTC CCGCCGCTCC CCCTGGCTCT
GAACCCCGCA AACCGGAGAT CGGATGA
 
Protein sequence
MTGPTGHAAS GHLSAGRLLA YALPALALAI PTIPAFVLLP AFYAQDLGLG LAAVGTAMVV 
ARLFDGLCDP LIGLMSDRHA LPWPGGKRRR KPYVLAGALL AGLGLVQLFS PPAEPGIGYL
LGWSMVLSLG WTLVSVPYTA WGAELSGDYH ERARITGWRE GLAMVGVLVA GAVPALALAA
GLDRAGGLAW VAWAAILLGV PGLALLLLRV PEAPPPSSAP PALSWRDLRA LAANGPFLRL
VVAWFLNGMA TGLPAALFPL IVDHLLRGSE AARNGLILVY FLSGVVFIPL WLGLARRIGK
HRAWCVAMIV AIAAFVWVPL LGPGDVLAFG VICALTGMAL GADLALPPAI QADVIDLDRL
RTGQRREGLF FALWAMAQKL ALALAVGIGF WGLALAGFET SATTQSPQAL TALVVIYALI
PIGLKVCAIL VVWGHPLTLG RQKAIRRLLD RAAPAAPPGS EPRKPEIG