| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0545 |
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| Symbol | fliF |
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| ID | 3833652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 640864 |
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| End bp | 642519 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824629 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_425636 |
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| Protein GI | 83591884 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTCTT TCGTTCAGAC CATGCGCAAT CTGGGGCCTG TCCGCCTGGC CGCCTTGGCC
GGCGTCGCCA TCGCCCTGAT CGGCTTCGTC ATCTACGTCG CCTCGCGTTT GTCGGGGACG
TCGATGGAAC TGCTTTATGG GGATCTGGCT CCGGCCGACG CCAAGCAAAT CATCGCCCAG
CTCGAAGAGC GGAATATCCC CTATCAAATG GCCAATGACG GACGGTCGGT TTTGGTTCCG
TCCGATCAGG TTTTAAAGCT GCGGGTTCAG ATGGCCGAAT CGGCCCTGCC CAGCGGCGCC
ACCGTCGGCT ACGAGATTTT TGACAGCGCC TCGGCCCTGG GATCGACCCA GTTCACCCAG
AATATCAATA TGGTCCGCGC CCTGGAGGGC GAGTTGGCGC GCACCGTGCG CACCATCCAG
GGGGTGGAGG GCGCCCGCGT CCACCTTGTC TTGCCCAAGC GCGAACCCTT CACCCGCGAT
CAGGTCGCCC CCAGCGCCTC GGTGGTGCTG TTGATGAAGG GACGGCGCCT GCAGCCCGAA
CAGGTCGTGG CGGTGCAGAA CCTCGTCGCC GCCGCCGTGC CGGGCATGAA ACCCGGTCAG
GTGTCGATCA TCGACGAGCG TGGCACGCTG CTGACGCGCG GCATGGGCGA GGAAGGGGCG
CTGATCGCCC AGAACCAGGA CGAGTTGCGC AAGGCCGAGG AACGCCGCCT CGCCCAATCG
ATCGAACAGC TTCTTGAACG CACCATCGGC GTTGGCAAGG TCCGCGCCGA GGTGGTCGCC
GATATGGATT TCAACCGTAT CGTCACCAGC CGCGAAAGCT TCGACCCCAA TGGTCAGGTG
GTGCGCTCGA CGACGACGGT GGACGAACAG AACAAATCCT CCGACGCCGT CTCCAACGTC
TCGGTCCAGC AGAACCTGCC CGAGGCCCAG TTCGCCGGCA ACGGCGGGGC GCCGACCTCG
CAGACCAGCG AAAATCGCAC CGAGGAAACC GTCAACTACG AGATCACCAA GATCGTGACC
AACGAGGTCA AGGAAGCCGG GGTGGTCAAG CGCCTGTCGG TCGCCGTGAT GGTCGATGGT
ACCTCCACCA CCAATGACGC CGGCGTCACC ACTTGGCAGC CGCGCTCCGA CGATGAAATG
CAGAAAATCA CTTCGCTGGT TCGCTCGGCG ATGGGCTACG ATCAGGCCCG TGGCGACCAG
ATCGAAGTGG TGAACATGCA GTTCATCGAT CCGGGCGCCC TGTTCGACGA TGCCGCCGCC
TGGGAATTCC TGGGCTTCAC CAAGGCCGAG GTCATGAAGA TGGCCGAGGG TCTGGGCGTG
GCGGTGGTCG CCATCTTGAT CATCTTGCTG GTGGTACGGC CTTTGGTGCA GCGCGCCTTC
GAGAATTTGC CCAGTGGCGC GGACCAGGGC GGCGCCGGCC TGTTGACGGC GGAGATGCAG
AGCCATCCCC AGTTGACCGG TCCGGGGGGC GGGTCGATCC CCGCGGGCAT GCTCGGCATG
CCCGACGAGA TGGACGACGC CGAAGAACTG ATCGATATCG ACAAGGTGGA AGGCCGGGTC
AAGGCGTCAA GCCTGCGCAA GATCGGCGAG ATCGTCGACA AGCACCCCGA AGAAGCGCTT
TCCATCATCC GCAACTGGCT CTATCAGGAG TCCTGA
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| Protein sequence | MNSFVQTMRN LGPVRLAALA GVAIALIGFV IYVASRLSGT SMELLYGDLA PADAKQIIAQ
LEERNIPYQM ANDGRSVLVP SDQVLKLRVQ MAESALPSGA TVGYEIFDSA SALGSTQFTQ
NINMVRALEG ELARTVRTIQ GVEGARVHLV LPKREPFTRD QVAPSASVVL LMKGRRLQPE
QVVAVQNLVA AAVPGMKPGQ VSIIDERGTL LTRGMGEEGA LIAQNQDELR KAEERRLAQS
IEQLLERTIG VGKVRAEVVA DMDFNRIVTS RESFDPNGQV VRSTTTVDEQ NKSSDAVSNV
SVQQNLPEAQ FAGNGGAPTS QTSENRTEET VNYEITKIVT NEVKEAGVVK RLSVAVMVDG
TSTTNDAGVT TWQPRSDDEM QKITSLVRSA MGYDQARGDQ IEVVNMQFID PGALFDDAAA
WEFLGFTKAE VMKMAEGLGV AVVAILIILL VVRPLVQRAF ENLPSGADQG GAGLLTAEMQ
SHPQLTGPGG GSIPAGMLGM PDEMDDAEEL IDIDKVEGRV KASSLRKIGE IVDKHPEEAL
SIIRNWLYQE S
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