| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0440 |
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| Symbol | |
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| ID | 3833774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 517462 |
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| End bp | 518433 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637824524 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_425532 |
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| Protein GI | 83591780 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.292372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCATT CCGTCGCGCC CGTTGTTTCC CAGCCCGCCG CCCTGTCCCC TACTCCGCCC
AAGGCGACCA TCGGCTTCAC CCTGGCCGAA GGCGATCTTG ACCGTCTGGA CCGGCAGTTG
GGGCGCATCG CCACTTTGGG CGCCGATGGC GTGGAATTGA ATCTGACGGC GCTCGGCTGC
CTTGTCGGCG GTCGGATCAT CGGCCCGCGA CTCGATGCCA TCCGTCGACT GGTCGCCCGC
CGCCAATTGG CCGTCACCGT CCACGGCGTC TTGTCGATGT CATTCATGGA TACCGACCAT
GCGTCGGCGC ACCACGCCGT GGCCAAGGCC TCGGTCGATG TCGCCACCGC CCTGGGCGCC
CGCACCCTGG TCGTTCATAC GGCCTGGATC GAGACCGCCC GCTTCGCCGC GCGGCGCGAT
GACCTGATGG CTTTGGAACA AGAGGGCCTG CGCCGCATGG CCGAGGCGGC CGAAGCCCAC
GGGCTCATCG TCGCCCTGGA GAATATGCCG CCGACCCTTG AGTCGCTGAG CGGCGGCATG
ACCAACCACG GCCTCGATCC GCTCTCGATC GCCGCCCAGG TGCGGGCCGT CGATCATCCG
GCCTTGCGCG CCACCATCGA CTTCAGCCAC GCCCATATCG CCGCGCGCCA TTTCGGCTGG
GATCTGACCG ACCGTCTGGC CGCCCTGGCG CCGCTGACCG CCCACCTGCA TCTCCATGAC
AGCCTGGGGC GGGTCCAGAC CATGAGCGGA CTGTTCCCCG GCGAGGCCAG GGTGTTTGGC
GAGGGCGATC TTCACCTGCC TTTGGGCTGG GGCGACGCCC CCTTCGAAAC CGTGCTTCCC
CGCCTGCCGC TGGCCGGGGC GATCACCGTC GCCCTGGAAA TCGGCTTGGA AAAGCACGAC
GACGCGACGG CGGCCGACAG CCTGCTCCGG GCCCGCGCCT ATTGCGCCAG CGCCGCCCGC
GCGGTGAATT AG
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| Protein sequence | MPHSVAPVVS QPAALSPTPP KATIGFTLAE GDLDRLDRQL GRIATLGADG VELNLTALGC
LVGGRIIGPR LDAIRRLVAR RQLAVTVHGV LSMSFMDTDH ASAHHAVAKA SVDVATALGA
RTLVVHTAWI ETARFAARRD DLMALEQEGL RRMAEAAEAH GLIVALENMP PTLESLSGGM
TNHGLDPLSI AAQVRAVDHP ALRATIDFSH AHIAARHFGW DLTDRLAALA PLTAHLHLHD
SLGRVQTMSG LFPGEARVFG EGDLHLPLGW GDAPFETVLP RLPLAGAITV ALEIGLEKHD
DATAADSLLR ARAYCASAAR AVN
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