Gene Rru_A0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0400 
Symbol 
ID3833811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp476995 
End bp478437 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content67% 
IMG OID637824484 
Producthypothetical protein 
Protein accessionYP_425492 
Protein GI83591740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0338221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGA AGAGGACCGT CAACGCTCAG AATCTTGAAG CCCTCGGCGC GCCGCGTCTG 
GCCGCCTTGA TGATAGACAT CACCAAGGGC AATGCGGTCG CCCGGCGCCG TCTGCGGCTT
GAACTGGCGG GGGAGACAAG TCCGAAGGAG GTGGCTCGCG AGGTTCGCAA GCGACTGGCG
ACCCTGGCCC GGTCCCGATC CTTCGTCGAT TGGCAGGGGG TTCGCGCCCT TGCGGCCGAT
CTCGAGACCC AGCGTCGGGC GATCGTCGAA ACCGTGGCTG TGGCCGATCC CAAGGAGGCG
CTCGATCTTC TGTGGCTGCT CCTGGATCTG GCGCCCTCGG TCTATGAGCG GTGCGGCGAG
AGCAACGGGA TGATCGGCTC GGTTTTTGAC GAGGCCGGCG GCGATCTTGG ACCCCTTGCC
GCCCGCGCCC GGCCCAACCC GCTTGCCCTG GCGGACCGGG TCTATGGGGC TTTGGTCAGC
GATGATTATG GGCAGTTTGA CGGGCTGATC CGCACCCTGG CCCCCGTTCT GGAGGCCTCC
GGCCTGGAGC GCTTGAAGCG GCTTATGGTG GCGTTGTCCC AGCGACCGAT CGACCGCCCC
GCTCAGAAGA AACGCGGGGA CATCGGCAGG TCCTCGTTGG CGTCGACCCA TGCCGTCGAT
GTCGTCGAAA GCAGACGCGT GAGGATCGCG CGATACGCCC TGCAGGAAAT CGCCGATGTC
CTGGGCGATG CCGACGCCTT CATCGCCCAG TTCGACGAGG AGACCCGCAA GGTTCCCGGG
ATCGCCGCCG ACATCGCGTC GCGTTTGCTG GCGGCCGGCC GCGCCGAGGA AGCCCTTCAG
AGGCTGGAGG TGGCCCGCCC CGCGCCCGCG TCCCGGGACT GGCCCGACTT TTCTTGGGAG
GATGCGCAGA TCGCCGTGCT GGAGGACTTG GGGCGAACCG ATGAGGCCCA GGCCGTGCGC
TGGGAGTGCT TCCAGCGCTC CTTGTCGGCG CCTCATCTGC GCGACTACCT GAAGCGGCTT
CCCGATTTCG AGGACGTGGA GGTCGAGGAA AGGGCCCTTG ATCATGTCCA GGCAGCACCG
TCGATGATCC GGGCGCTGGC CTTCCTGGTG GCTTGGCCAG CTTTGACCCG TGCGGCCTCC
CTGGTTGTCG CCCGCTCCGA GGATCTGGAT GGCAACCAAT ACGACTTTCT GCCCCATGCC
GCCGACGCGC TCGCGGCCAA ATTTCCCCTG GCCTCGACCT TGATCCTGCG GGCCCTGATC
GACGAGTCGC TCACCAAAGG CCGCGCCACC CGCTACAAAC ATGCGGCCCG CCACCTGTGC
GACTGTGCGA GCCTCGCGGC CTCGATCCCC AAGGACGGCG CCGTCGAACC CCATGAGGCC
TATGTCGCCA GACTGCGCCG GGAGCACGGC CGCAAGACGG CGTTCTGGGC CCTTGTGGGA
TAA
 
Protein sequence
MASKRTVNAQ NLEALGAPRL AALMIDITKG NAVARRRLRL ELAGETSPKE VAREVRKRLA 
TLARSRSFVD WQGVRALAAD LETQRRAIVE TVAVADPKEA LDLLWLLLDL APSVYERCGE
SNGMIGSVFD EAGGDLGPLA ARARPNPLAL ADRVYGALVS DDYGQFDGLI RTLAPVLEAS
GLERLKRLMV ALSQRPIDRP AQKKRGDIGR SSLASTHAVD VVESRRVRIA RYALQEIADV
LGDADAFIAQ FDEETRKVPG IAADIASRLL AAGRAEEALQ RLEVARPAPA SRDWPDFSWE
DAQIAVLEDL GRTDEAQAVR WECFQRSLSA PHLRDYLKRL PDFEDVEVEE RALDHVQAAP
SMIRALAFLV AWPALTRAAS LVVARSEDLD GNQYDFLPHA ADALAAKFPL ASTLILRALI
DESLTKGRAT RYKHAARHLC DCASLAASIP KDGAVEPHEA YVARLRREHG RKTAFWALVG