| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0314 |
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| Symbol | |
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| ID | 3833669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 382129 |
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| End bp | 383646 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637824396 |
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| Product | hydrogenase 4 subunit D |
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| Protein accession | YP_425406 |
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| Protein GI | 83591654 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0167658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATG ATGTTGTGAC CCGGGTCCTG CCCGCGGGCG GCGCCGCCGT CCCTGGTTCG
GGCCATGGGC CGGGCGCCGT GCCCCGCTGG AACGGGGCGG GCCATCGGCC GGCTTCCCCC
CGGGCCGGTG CCAATGGCGT GATTTTCCTG GCCTCGCTTA TCTTCTCGGG GCTGGCCCTG
GCCGGCGCTA TCGCCGCCAT TCTGGCCGTT TTCCCCGGTC CCTGGACCCT CGGCCTGGGG
CGTCTGCCCT GGCTTGCCAG CGATCAGGCC CTGTTCGGGC TGGCGCTTGA TCCGCTGTCG
TGCCTGATGC TGGTGGTGAT CACGCTCTGC GGCTTCCTGG TGGTGCTCTA CTCGGGCGGT
TACATGAGCC TGGGCAACGT CGAGCACCCC TCCGACGCCA ATCTGGCGCG CTATTACTTC
TTTGTTTGCC TGTTCATCAC GGCGATGGTC GGGCTGGTGT CGTCGCCCAA TTACTTCCAG
CTTTTCCTGT TCTGGGAACT GACGACGCTG TGTTCCTGGG GGCTGATCTC GTTCTATGGC
GATGCCGAGG CCCTGAAGTC GGCCTATAAG GCGCTGCTCA TCACCCATGG CGCCGGGCTG
TTCCTCGCCG CGGCCGTGGT GCTGATCTAT GTCGAGACCG GCTCTTTCGC GTTCGACGCG
ATCAATCTGC TGACCCCGGG CCTGAAAAGT CTGGTGATCG CCTTCATGGG CATCGCCGCC
CTGGCCAAGG CCGCCCAATT CCCCTTCTTC ACCTGGCTGC CCACCGCCAT GGCCGCCCCG
ACCCCGGCCA GTTCCTATCT CCACGCCGCG GCGATGGTGA AGGCCGGCAT CTATCTGCTG
GCGCGGCTGG CGCTCAGCGT CGACGCCTTC CCGCCCGAAC TCGGGCTGGC GCTCAGCGTC
ATCGCCATCG TCACCATGTG TCTGGCCGTC GTCCTTTATT TCCCGCAAGA TGATCTGAAG
CGGCTGCTCG CCTTCTCGAC CATCGCCAAT CTTGGCTACA TGGTTCTGGG CATCGCCATG
GGCGCCATGG GCTCGCGGAC GGCGCTGGAA GGCGGGATGC TTCATCTCGT TGGCCATTCC
TTCACCAAAA GCCTGCTGTT CCTCGCCGTC GGCGCCATTT CCTACGCCAC CGGCACCCGC
AAGATCGGCC TGCTCAGCGG TCTGGGCCGC AAGATGCCGG TCACCGCGCT GGCCTTCGTG
CTGGGCGCCA TGGCGATCAG CGGCATGCCG CCCTTCAACA TGTTCTGGTC CAAATACCTG
ATCGTTTCGG GCGCCATCGA GCTCAGCTCG ACCTGGGGCT GGACGCTGGC CGTCCTCACC
CTGGCCGAGA GCGTCGCCGG CTTCGCCTGG TTCTTGCACA TCGTCCACAA GGTCTTCTTC
GGCCCCGTCT CCCCGACCGC CGAGAATGCG CGCGACCCCG GCGCGGCCAT GCTGATCCCC
CTCATCGTCC TGATGGCCTT CAGCGTGCTC TCCACCGTTT TCGCGCTGCC CATGATCCAA
CAGTCGTTCG GGGGGTGA
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| Protein sequence | MLDDVVTRVL PAGGAAVPGS GHGPGAVPRW NGAGHRPASP RAGANGVIFL ASLIFSGLAL
AGAIAAILAV FPGPWTLGLG RLPWLASDQA LFGLALDPLS CLMLVVITLC GFLVVLYSGG
YMSLGNVEHP SDANLARYYF FVCLFITAMV GLVSSPNYFQ LFLFWELTTL CSWGLISFYG
DAEALKSAYK ALLITHGAGL FLAAAVVLIY VETGSFAFDA INLLTPGLKS LVIAFMGIAA
LAKAAQFPFF TWLPTAMAAP TPASSYLHAA AMVKAGIYLL ARLALSVDAF PPELGLALSV
IAIVTMCLAV VLYFPQDDLK RLLAFSTIAN LGYMVLGIAM GAMGSRTALE GGMLHLVGHS
FTKSLLFLAV GAISYATGTR KIGLLSGLGR KMPVTALAFV LGAMAISGMP PFNMFWSKYL
IVSGAIELSS TWGWTLAVLT LAESVAGFAW FLHIVHKVFF GPVSPTAENA RDPGAAMLIP
LIVLMAFSVL STVFALPMIQ QSFGG
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