| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0267 |
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| Symbol | |
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| ID | 3834587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 331970 |
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| End bp | 333694 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637824347 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_425359 |
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| Protein GI | 83591607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATGT TTCCGGTCGG CCGCTGGGTT CGGACCGTGG CTTTGGGCTG CTGCCTGATG
GCGGGCGCCG GATCGGCCGC CGCCAAGCCG CCGGGGGCGG TGCTCGGCCA AGCCGATGTG
GCGCGCTATC GCACCATCTT CGCCCTTCAG GACAAGGGGC TGTGGTCGGA TGCCGACCGC
GAGATCCTTG GGCTTGAGGA TCCGCTGCTG ATGGGGCATG TCCGCTATCA GCGCCTGATG
CATCCCACCG CCTATCGGGC CAATGCCGAC GAGTTGCGGA CATGGCTGGC GACCTATGTC
GACCATCCCT GCGGTCAACG GCTGTTGCGG CTGGCCCAGC GCCGGGGCGT GGCGCCGCCG
ATCGATCCCG ATGCCCCGCT GTTTGGCGAT CTGGGCAGCG GAGAGGTGGG CGACGGGCCG
GGCTGGGGTT TGGAGGGCGT CTATCCGCCG GGCCAACGCC CCACCGCCCA GGAGCGCTGG
GAGATTTTCC TGCAAGCCCT GGGGGCGGGG CAGACCCTGC GGATGAAGGA GCTGATCACC
GGGGCGCGCA ATGGCGTGCT CGCCGATATC GACCAGGACC GCATGAAGGC GGCGCTGGCC
TTCGCCTATT TCGTCGAGGG CCGCGATGAG TGGGCGATCG CGTGGGCGCG CGAGGCGATC
GCCCGTTCGG GCAAGCGTTT GCCGATCGCC CATTGGGCCG GCGGTCTGGC GCTGTGGCGG
AGCGGCAAGC CGGCCGAGGC CCTGGGCCAT TTCGAAGAGG TGATCCGCGC CCCCGGGGCG
TCCCCCTGGC TACGCTCGGC CGGAGCCTTC TGGGCGGCGC GCAGCGCCCT GCGGGCCCGC
CATCCCGAGC GGGTCAGCCT TTTGCTTGAA CGGGCGGCGG CCGAGCCGCG CACGTTCTAT
GGGCTGGTGG CGCTGCGCGC CCTTGGCCGG CCGATGCCGT TTTCCTGGAA CGCCCCAAAG
CTTTCGGAGC GCGCCTGGGA GCGGCTGGAG CGGTTGCCCG GGGCGCGGCG GGCGATGGCC
CTGGTGCAGA TCGGCCGATC GCGCGAGGCG GCCGAGGAAC TGACCCCGCT TTACGCCGCC
GCCGGTCCCG AACTGCGCGA TGCCCTGTTG GGGGCCACCC TGGCCCTGGG CCTGCCCACT
CTGGCGCTCG ACATCGGCCG CACCGATCCC CGGGCCGGCG ATGTCGCGCG CTTTCCCCTG
CCGCCCTGGT CGCCCGATGT CGGCTGGTCG CTTGACCGGG CGCTGATCTA TGCCTTCGCC
CGCCAGGAAA GCGCCTTCGA TCCCCAGGCG GTCAGTCCGG CCGGGGCCTT GGGGCTGATG
CAGTTGATGC CGGCCACCGC CTCGCATGTC GCCGGCGACC GGGCTTTGGC CGATGCCGAA
GGCGGCGAGG TTTTGTTCCA GCCGACGGTC AATCTCAGTT TGGGGCAGGC CTATCTGGCC
GAGCTTCTGG CCAGTTCGCA AATCCGGGGC AATCTTTTCT TTCTAGCCAC CGCCTATAAC
AGCGGTCCGG GTCGCTTGGC CGGCTGGCTG CGCGAAGGGC GCTATGACGA GGATCCGCTG
CTGTTCATCG AAAGCATCGG CAGCCGAGAA ACCAGACTGT TCATCGAACG GGTTCTGACC
AATTATTGGG CCTACCGCTC GCGTCTTGAT CAATCGCTTT CCTCGCTTGA CGCGGTCGCC
GCCGGGGACT GGCCGCGCTA TCAGGCCGCC AAGCCGGCGC GCTGA
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| Protein sequence | MGMFPVGRWV RTVALGCCLM AGAGSAAAKP PGAVLGQADV ARYRTIFALQ DKGLWSDADR
EILGLEDPLL MGHVRYQRLM HPTAYRANAD ELRTWLATYV DHPCGQRLLR LAQRRGVAPP
IDPDAPLFGD LGSGEVGDGP GWGLEGVYPP GQRPTAQERW EIFLQALGAG QTLRMKELIT
GARNGVLADI DQDRMKAALA FAYFVEGRDE WAIAWAREAI ARSGKRLPIA HWAGGLALWR
SGKPAEALGH FEEVIRAPGA SPWLRSAGAF WAARSALRAR HPERVSLLLE RAAAEPRTFY
GLVALRALGR PMPFSWNAPK LSERAWERLE RLPGARRAMA LVQIGRSREA AEELTPLYAA
AGPELRDALL GATLALGLPT LALDIGRTDP RAGDVARFPL PPWSPDVGWS LDRALIYAFA
RQESAFDPQA VSPAGALGLM QLMPATASHV AGDRALADAE GGEVLFQPTV NLSLGQAYLA
ELLASSQIRG NLFFLATAYN SGPGRLAGWL REGRYDEDPL LFIESIGSRE TRLFIERVLT
NYWAYRSRLD QSLSSLDAVA AGDWPRYQAA KPAR
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