| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0188 |
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| Symbol | |
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| ID | 3833879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 227085 |
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| End bp | 228815 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824266 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_425280 |
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| Protein GI | 83591528 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.55543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTGC TGGACGTTTT GCGCATGGCC GACGGCCCTC ACGCCGCGCG GGTCCGGCGG
GGCATGCTGT TCAAGATTGG CGAGACCTTT TGCGCCGCCG TGCCGTTCGC CGCCCTCTAT
GGCGCCTTGA TGCTGGTGTT CGGCGAGGCA CCCTTCGGCA TGGGCGAGAT CCTCGGGCTG
ACCGGCCTGG TCGCGGCGGG CCTCGCCGGA CAATTCGCCT TCGGAGTCCT TGGCGCCCGC
ACCGCCTTCA TCAGCGGCTA CGGTATGATG GGGGATTTCC GCTTCACGAT GATGGATCAT
CTGAGCAAGC TGCCCCTGGG CTTCTTCACC TTTCAGCGTA CTGGCGCCCT GACGACGACC
GTCGCGGAAA ACGTGAAAAT GGTCGAAGAG ATGTTCACCA AGGTCGTGAA CGAGATCGTG
GCCGGGTTCA CCTTGCCGCT GTTCATCGGC ATCCTTCTGG TGGTCATCGA CTGGCGCATG
GGGCTTGCCG CCGTGGCCTC CGTGCCCCTG GCGTTCGCGG TTCTGCGACT GACGCAAGGG
CGTTTCATGC GCCTGTCGGC CAAGCGCGTG GATGTCCATG CGGAGGTCTC CGGACGGCTG
CTTGAATACA TCGACGGCCT CCGCGTCATC CGCGGCTATG GCTTGGCGGG CGCCAAATTC
GCTTCCTTGC GCGATAGCCT GGACACCCAG CGACGGGTCT CCGTCGCCCT GGAGATCCAA
GGCGGGCTTG GCATCATGGC CATGGCCGTG GTCTTGGAAA TGGGCTTCAT CGCGCTGTTG
ATGGTCGGCG CCTTCGCCAT GCTGGGAGGA GCGCTGTCTC CCGCCAGTTA CCTGATGGCG
ATGGTTCTGG CGCAGAAGTT CTATGCGCCC ATCACCCGCT CGCTCATGCT GCTGGTGGAT
ATCAAGTATT TGTCCTTGGC CCTGAAGCGG GTTCAGACCC TCTTGAATGC GCCCCGTCTG
CCCGAACCGG TCGAGCCGAA GGTGCCGTCG AACAACGCCA TCGTCTTCGA CGCGGTATCG
TTCCGCTACG ACGAGGCCGG GGACGAGCCG GCCTTGTCCG AGGTCACCTT CACCCTGCGC
GAGGGCACCA CGACGGCCCT GGTCGGGCCG TCCGGCGCCG GAAAAAGCAC GGTGGCCCAC
TTGATCGCGC GCTTTCACGA CGTCACAAGC GGCGCCGTCC GCATCGGTGG CGTCGATCTC
CGCGACATGG CCTCGGACGA GCTCATGCGC CGCGTCTCGA TGGTGCTGCA AGATGTCCAC
CTGTTCGACG ACACCGTCGC CAACAACATC CGCATCGGCC GGTCGGACGC CAGCGACGAG
GACGTGGTGG CCGCCGCCCG TCACGCCCAG TGCCATGCGT TCATCGAGGC CCTTCCCCAG
GGTTATCAGG CCCCCATTGG GGAAGGCGGG GCGTGGTTGT CGGGCGGACA GAAACAACGG
CTGTCCATCG CCCGCGCGCT GCTGAAAGAC GCCCCCATCG TCTTGCTCGA CGAATCCACC
GCCTCCCTTG ATCCTGAATG CGAGGCGGCC TTCCATCAGG CCTTCAAGAT CCTGGCGGCC
GGGAAAACCG TGCTGGTCAT CGCCCACCGC CTGCACACCG TCGTAAACGC CGATCAGATC
GTGGTGATGG AGCGCGGTCG CGTCGTCCAG ACGGGAACGC ACGGCGATCT GATCGCCAGC
CCCGGTCTCT ACCGCACCCT TTGGACGGAC ATGGCGGAAC CGACCCCATA A
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| Protein sequence | MIVLDVLRMA DGPHAARVRR GMLFKIGETF CAAVPFAALY GALMLVFGEA PFGMGEILGL
TGLVAAGLAG QFAFGVLGAR TAFISGYGMM GDFRFTMMDH LSKLPLGFFT FQRTGALTTT
VAENVKMVEE MFTKVVNEIV AGFTLPLFIG ILLVVIDWRM GLAAVASVPL AFAVLRLTQG
RFMRLSAKRV DVHAEVSGRL LEYIDGLRVI RGYGLAGAKF ASLRDSLDTQ RRVSVALEIQ
GGLGIMAMAV VLEMGFIALL MVGAFAMLGG ALSPASYLMA MVLAQKFYAP ITRSLMLLVD
IKYLSLALKR VQTLLNAPRL PEPVEPKVPS NNAIVFDAVS FRYDEAGDEP ALSEVTFTLR
EGTTTALVGP SGAGKSTVAH LIARFHDVTS GAVRIGGVDL RDMASDELMR RVSMVLQDVH
LFDDTVANNI RIGRSDASDE DVVAAARHAQ CHAFIEALPQ GYQAPIGEGG AWLSGGQKQR
LSIARALLKD APIVLLDEST ASLDPECEAA FHQAFKILAA GKTVLVIAHR LHTVVNADQI
VVMERGRVVQ TGTHGDLIAS PGLYRTLWTD MAEPTP
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