Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0016 |
Symbol | |
ID | 3833904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 17356 |
End bp | 18378 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824086 |
Product | 3-beta-hydroxy-delta(5)-steroid dehydrogenase |
Protein accession | YP_425108 |
Protein GI | 83591356 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGCC GCGTCGTTAC CGTTTTCGGG GGCTCGGGCT CCATCGGCAG GCAATTGGTC GCCCTGTTGG CCGACCAGGG GGCGCGGGTG CGCGTCGCCG TGCGCGATAC CGAGAAGGCC CATTTCCTCA AGCCCCTCGG CCAACTGGGC CAGATCGCCC CGATCTCGGC CTCGGTGTCG GATGCCGCTT CGGTCAAGCG CGCCGTCGAA GGCGCCGATC AGGTGGTCAA TCTGGTGGGC ATCCTGGCCG AAAGCGGCCG GCGGACCTTT CAGGCGGTTC ATGTCGACGG GGCGGCCACC GTCGCCCGGG CCAGCGCCGA AGCCGGCGTC GACGCCCTGA TCCACATGTC GGCCCTGGGG GCCGATGAGG CCTCGGACGC CAACTATAGC AAAACAAAGG CTTTGGGCGA AAAGGCCGTG CGCGAGGCCT TTCCCGCCGC CACCATTTTG CGCCCCAGCG TTGTCTTCGG CCCCGACGAC GGGTTCTTCA ACCTGTTCGC CGGTCTCCAG CGGCTTTCGC CGGTGCTGCC CTATTTCACC CGCGACGGCT TCCGGCGCGG CGGCTCGGGC GTTTGCGGGA TCGATCTGGC GGGCAGCGGC GGCCCGAAGT TCCAGCCGGT TTATGTCGGC GATGTCGCCC GCGCCATGAT CGCCATCCTC GATACCCCGG CCCTGCGCGG CAAAACCTAT GAACTGGGCG GCCCCCGGGT TTATTCCATG AAAGAGATCA TGGATCTGGT GGTCGCGGTG ACCCGCCGGC GCACCCTTGT GGTTCCGCTG CCGTTCTGGG TCGCCCGGCT GCAGGGGCGT TTGCTTGAAA AGCTGCCCAA TCCGCCGCTG ACCAGCGATC AGGTGCGGCT GATGGAAGTC GACAACGTGT GTTCGGGCGC CCTGCCCGGT CTTGGCGATC TTGGCATCGA GCCCGAGGCG GCCGAGGCGA TCTTGCCCAC CTATCTCAGC CGTTTCCGCG GGCTTGACCG CCACATGATC CTGCGCGGCG ACGGCCGCCC GCCAAAGGTG TGA
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Protein sequence | MTGRVVTVFG GSGSIGRQLV ALLADQGARV RVAVRDTEKA HFLKPLGQLG QIAPISASVS DAASVKRAVE GADQVVNLVG ILAESGRRTF QAVHVDGAAT VARASAEAGV DALIHMSALG ADEASDANYS KTKALGEKAV REAFPAATIL RPSVVFGPDD GFFNLFAGLQ RLSPVLPYFT RDGFRRGGSG VCGIDLAGSG GPKFQPVYVG DVARAMIAIL DTPALRGKTY ELGGPRVYSM KEIMDLVVAV TRRRTLVVPL PFWVARLQGR LLEKLPNPPL TSDQVRLMEV DNVCSGALPG LGDLGIEPEA AEAILPTYLS RFRGLDRHMI LRGDGRPPKV
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