Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4825 |
Symbol | |
ID | 6285562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1164536 |
End bp | 1165795 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642619301 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001893336 |
Protein GI | 187926991 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.700339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTG CGGTACTTTC CTCATCGGCC GCTGGGCAGT TCTCGCGCCA TCACCGTTGG AAGGTCCTCG GCGTGGGCGT TGCGGCCAAC GCCAGTTTTT CAGCGGCATT CTCGGGTATT CCCACGACGG CGGTGTTCAT CCGCTCCGCC TATCACCTGG GCAATGCGGA GCTTGGCATC GCCCTCGGGC TGCTCGGGCT CGGGATTGCC ATCAGCGAGT TGCCGTGGGG CCTGCTGACC GACCGTTGGG GCGATCGCAC CGTGCTCCTG GCGGGCCTCG GCCTGACGGC GCTGGCGCTG CTGCTGATGG CCGGCTTTGC GGCGCCTGCG CATGGCAACG TGCCGCCGCT GACGTGGCTG GCTGCGGGCA TGCTGAGCGT CGGCTTGCTG GGCGGCAGCG TGAATGGCTC CAGTGGCCGC GCCGTGATGG GCTGGTTTCG CGAAGGCGAG CGTGGGCTGG CCATGAGCAT CCGCCAGACC GCCGTGCCGC TGGGCGGTGG CATTGGCGCG CTCGTGCTGC CGAGCCTGGC GGCACACGCG GGATTTGCCG CGGTGTATGG CGTGCTCGCA GCCGCCTGCG CGCTCACAGC AGTGCTGACG TGGCTGTGGG TGCACGAAGC CGCGCCGGCA GCAGACGCTG GCGTTGCTCG CGTGGTTTCC GAGGGGCCCG GCCCGTTGCG CGACGTGATG CTCTGGCGGA TGGCGCTGGC GATCGGGCTG CTGTGCGTGC CACAGGGCGC GGTGGTGGCA TTTGCCACCG TCTTCCTGCG CGACTTCGCA CATGCCGATG TGCTCACCCT GAGCTTGACC ATGGCGGCGG TGCAGGGCGG TGCGGCGGTG ATGCGCGTGT GGAGCGGCCG GTGGACGGAT CGCCACGGCA ACCGACGTGC CTATCTGCTG GCCTGCGCAC GCTTGAGCGC AGCCCTGTTC GTCGTGCTGG CTGGCGTGGC ATGGCTCACC GGCACGCTGC ACGCCGACCT GGCAGTCATG CGTGGTGTGC TGGTGGCCGC CATCGTGGCG GGCGGCATTT GCGTGTCGGC GTGGCACGGT GTCGGCTACA CCGAGATGGC CACGCTGGCG GGCGCGCAGC GCGCCGGCAC GGCGCTGGGC CTGGGCAATA CGGGGGCCTT TGCAGCGCTG GGGCTCACGT CGCTGTTTTT GCCGCATGTG CTGGCATGGT CGTCCTGGCC GGTCGTGTGG CTCTTGGCGG CGGGCTGCGC CCTGATCGCA TGGCGGGTGC TGCCTGCCGC CGATCGATAG
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Protein sequence | MTTAVLSSSA AGQFSRHHRW KVLGVGVAAN ASFSAAFSGI PTTAVFIRSA YHLGNAELGI ALGLLGLGIA ISELPWGLLT DRWGDRTVLL AGLGLTALAL LLMAGFAAPA HGNVPPLTWL AAGMLSVGLL GGSVNGSSGR AVMGWFREGE RGLAMSIRQT AVPLGGGIGA LVLPSLAAHA GFAAVYGVLA AACALTAVLT WLWVHEAAPA ADAGVARVVS EGPGPLRDVM LWRMALAIGL LCVPQGAVVA FATVFLRDFA HADVLTLSLT MAAVQGGAAV MRVWSGRWTD RHGNRRAYLL ACARLSAALF VVLAGVAWLT GTLHADLAVM RGVLVAAIVA GGICVSAWHG VGYTEMATLA GAQRAGTALG LGNTGAFAAL GLTSLFLPHV LAWSSWPVVW LLAAGCALIA WRVLPAADR
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