Gene Rpic_4518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4518 
Symbol 
ID6285332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp844191 
End bp845219 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID642618999 
Productalpha/beta hydrolase fold 
Protein accessionYP_001893035 
Protein GI187926690 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0590754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC CCGCCGCTTC TGCGCACTCA AGACATGGCC CGCCAGTCGC ACGCCAGCAG 
TCTTCCCATG TGGTGCATTC CGGCGACGTC CGGCTGTTTG CGCGCATGAC GCAGCCCGAC
GAGGCGGCCG CACGGCAGCG CCCGGCCGTC ATCCTTGTGC ACGGTTATCC GGATGACAGT
TCCGTCTGGA ATGGTGTGCG CGACGCATTG GCGCGCCATT GCCGCGTCCT CACGTTCGAT
GTGCGTGGCG CAGGCCTGTC GGATGCGCCG ACCGACACCG CTGCCTACCG CATTGCGCAG
TTCGTGGATG ACCTCGCCGC GGTGGCGGAC CTGCTGTTGC CCGGCGAGCG ATTTCACCTG
GTCGGCCACG ACTGGGGTTC CATCCACAGT TGGGAATCCG TGACGACCGA TCGGTTACGC
GGGCGCATCG CGTCGTACAC GTCGATTTCC GGACCATGCC TCGATCACGT CGGCCACTGG
ATGCGCAGCC AGCTTGATGT CGGCACATGG GCAGCGAAGC GCGCTGTCTG GAAGCAACGG
CTGCAGTCAT GGTATGTCGG CTATTTCCAC TTGCCGTGGG TGCCGGAATG GTCATGGCGC
CTGTGGGCCG CACGTGCGTG GCCGTGGTGG TTGCGCCAGA CGGAAGGCGT GCACGGCGCG
GGGCGGCGGC CATCCCTGAC GCGCGATGCG TGCAACGGTC TGTGGATGTA TCGCGCCAAC
TTTCGCGAGC GGCTGGCCCA CCCGCAGGTA CGCGCGCCGC ACGCCCCCGT GCAGTTGATC
GTACCAACCC ACGACCGCTA CGTGAGCCCT GCCGTCACGC GCGCGGTCGA AGCGTGGGTA
TCGCACTATT GGCGGCACGA AATCGATGCA GGCCACTGGC TGCCGATGCG CCGTCCCGAG
TGGGTGGCCG ATTGCATCCG CCGGTTTGCC GACTACGTGG ACTCCGGACA CGAACCCGCT
GCGCTGCAAC AAGCGCGCGT ACCCGGGGTG TCCGCCGCAT TAGAAGATCC TGTCCAACGC
AAACGTTGA
 
Protein sequence
MSAPAASAHS RHGPPVARQQ SSHVVHSGDV RLFARMTQPD EAAARQRPAV ILVHGYPDDS 
SVWNGVRDAL ARHCRVLTFD VRGAGLSDAP TDTAAYRIAQ FVDDLAAVAD LLLPGERFHL
VGHDWGSIHS WESVTTDRLR GRIASYTSIS GPCLDHVGHW MRSQLDVGTW AAKRAVWKQR
LQSWYVGYFH LPWVPEWSWR LWAARAWPWW LRQTEGVHGA GRRPSLTRDA CNGLWMYRAN
FRERLAHPQV RAPHAPVQLI VPTHDRYVSP AVTRAVEAWV SHYWRHEIDA GHWLPMRRPE
WVADCIRRFA DYVDSGHEPA ALQQARVPGV SAALEDPVQR KR