| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4508 |
|---|
| Symbol | |
|---|
| ID | 6285127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 837216 |
|---|
| End bp | 837752 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642618989 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_001893025 |
|---|
| Protein GI | 187926680 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC TCTCCGAACA ACAGCAAGTG CAACGCACGT GGGACCGCCC GGAAGGCGCG
TCGTTTGAAG ACTGGATGAA CAGCCGCGTG GCGCGTTTCT CCACCCGCCG CTACGACTGG
GACGCCCTCA AGTTCCAGGC CGACTTCGAC CCGAAATACC GCCGTGCGCA AATGCGCTAC
CTCGGCACGG GCGGCACGGG CGTGGCCGCA GACACCAACA CGGTGCCGGC GGAGCACTTC
ACGTTTTCGA CGATGGTCAT TCCGGCCGGC CACGAAGGCC CGTCGCATCT GCACACCGAT
GTGGAAGAGG TGTTCTTCAT CATTCGCGGC AAGCTCAAGC TGGTGCTGGA GAAGGACGGC
GAGCGCTACG AAACCATCCT GACCGATCGC GATCTCGTCT CGGTGCCGCC CGGCGTGTAC
CGCGAAGAAA TCAACATCGG CGATGAAGAC GCGCTGATGT GCGTGATGCT CGGCGCCAAA
AAACCGATCA CGCCGACGTA TCCGCCCGAG CATCCGCTCG CCAAAATCAA GCGTTGA
|
|---|
| Protein sequence | MSDLSEQQQV QRTWDRPEGA SFEDWMNSRV ARFSTRRYDW DALKFQADFD PKYRRAQMRY
LGTGGTGVAA DTNTVPAEHF TFSTMVIPAG HEGPSHLHTD VEEVFFIIRG KLKLVLEKDG
ERYETILTDR DLVSVPPGVY REEINIGDED ALMCVMLGAK KPITPTYPPE HPLAKIKR
|
|---|
| |