Gene Rpic_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4506 
Symbol 
ID6285710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp835469 
End bp836296 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID642618987 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001893023 
Protein GI187926678 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0945557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG ACCTCATCCC AGAAGACGTG CAAGAAAAGT ACATCGTGCC GGGGCTCGAA 
CGCGGCCTGC GCCTGCTGTG CGAGTTCAGC CACAAAGACC GTGTGCTGTC GGCGCCGGAA
CTGGCGCGCC GCCTGAAGGT GCCGCGCTCC ACGGTGTTCC GCCTGCTGAC CACACTTGAA
GTGATGGGTT TTATCGAACG CGTCGACGGC GGCCGCGATT TTCGCCTCGG CATGGCGGTG
CTGCGCCTGG GCTTTGAATA TCTCGCGTCG CTGGAATTGA CCGAGCTGGG CCGCCCGCTG
CTCGATCGTC TGCGCGACGA GATTCACTAT CCGTGCAACC TCGTCGTGCG CGATGGCCGC
TCGATCGTCT ACGTGGCGAA ATCCGTGGCG CCCACGCCGT TCACCAGCTC GGTGAATGTC
GGCACGCGCC TGCCGGCGCA CGCCACGGTG CTGGGTCGTG TGCTGCTGGC CGATCTGTCG
CTGGCTGAGC TGCGCCAGCT CTATCCGGAG CCGCAGCTGG AAGTGTTTTC CGCCAATACC
CCGCGCACGG TCGAAGAGCT GTTCGAGATG GTCCAGCGCG ACCGCGAACA CGGCTACGTG
CTGCAGGAAG GTTTCTTCGA AGCCAACATC TCGACGATTG CTGCGCCGGT GCTCGACCGC
GCCGGCAAGG TGGTAGCAGC CCTCGGCACG ACGATTCCGT CGCCGCGCAT TGAAGCCGCA
CAGCTCGATC TGATGATCGA CAAGGTGCGC GCCGCTGCCG GCGAGCTGTC TTACCTGCTG
GACTACCGCC CCGCAGGCGG CAAGGTCGTC AACCTGTTCC GCGAATGA
 
Protein sequence
MSNDLIPEDV QEKYIVPGLE RGLRLLCEFS HKDRVLSAPE LARRLKVPRS TVFRLLTTLE 
VMGFIERVDG GRDFRLGMAV LRLGFEYLAS LELTELGRPL LDRLRDEIHY PCNLVVRDGR
SIVYVAKSVA PTPFTSSVNV GTRLPAHATV LGRVLLADLS LAELRQLYPE PQLEVFSANT
PRTVEELFEM VQRDREHGYV LQEGFFEANI STIAAPVLDR AGKVVAALGT TIPSPRIEAA
QLDLMIDKVR AAAGELSYLL DYRPAGGKVV NLFRE