| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4498 |
|---|
| Symbol | |
|---|
| ID | 6284971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 825853 |
|---|
| End bp | 827256 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618979 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001893015 |
|---|
| Protein GI | 187926670 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0152994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.24714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAG GTGTTTTGAT TGATAGCGGA ATTGACCACG ATGCGTCGCT GGGCGCGATG
AGCCTGGGCA AGATCGTTGC CCGCATCGAG CGGCTCAAGA GCAACGGCAT GCACGTGCGT
GCGCGTCTGC TGATCGGGCT GGCGACGTTC TTCGACGGCT TTGACGTGAT CGTCATTGCC
GCTACGCTGC CGCTGCTGAT CGCGCAATGG CATCTGACCC CGGCGCAGAT TGCTTTTGTG
ATCGGTGCCC CCGGCATCGG TCAGTTGATC GGTGCGCTGG TGTTCCCGAT GTTTGCGGAG
CGATTCGGCC GCGTGCGCAT GATCGGCTAT AGCGCGGGCA TCATCGGTTT GATGAGCCTG
CTGTGCGGCG TGGCGCCCAG TTTTGCCGTG TTTGCAGCGC TGCGTATCGT GCAGGGCATC
GGCTTGGGTG GCGAGCTGCC CGTAGCGGCC ACATACATCA ACGAAGTCAC GCGTGCCCAT
GGCCGCGGGC GCTTCGTGCT GCTCTACGAG GTGGTGTTCC CGATTGGTTT GCTGGTGTCC
AACGCGCTTG GGGCCTGGCT TGTACCGCAT TTCGGCTGGG AGGTGATGTA CTTTCTCGGT
GGCATTCCGC TCGTGCTGTT CTTCACGCTG CCCAAGGCCG TGCCGGAGTC CCCGCGCTGG
CTGGCGACCA ATGGACGCAT GGCCGAGGCC GATGCCGCGC AGGCACGCTT TGAAGCCAAG
GCGAAGGGGC CGCTGCCTCC GCTGGGCGAT ACCTCGGCCT TCGAGCAGAT GTCGCACCGC
CACCCGAAGC GCGGCATGCG CGATCTGTTC GGCCCCGTGT ACATCAAGCG CACGGTGGTC
GTGGCCATGC TGTGGGCGAC GTGCGGTTTT ATCCAGTACG GTCTGTCGAC GTGGCTGCCG
ACGGTCTACA AGACGATCTA TCACGCGCCG CTGCAACTGG CGCTGAATTT GGCCGCGCTG
GCGTCGGTGC TGGGTGTGGT CGGCTCGTTG GTCTGCGCGA TGATCGTCGA CAAGGTAGGC
CGCAAACCCG TGATGGTCGT GTCGTTCGTA CTCTGCGGCG TCTCGCTGGC GCTGGCTGGG
CTGCTGCACG AGCAGTCGCT CTATGTGGTG GCGGGGTTGT GCTCGTTGGC GCTGGGGTTG
ATGGCGTGCG GCTTCATCAC TGCCTATGTC TATACGCCGG AGCTGTACCC GACCAATATC
CGGGCGATCG GCTGCGGCAT GGGCGGCGCG TGGCTGAAGA TTGCGGCCAT CTTTTCACCC
ATGCTGATCG GATCGACCAT CGGCTCGGGC AACATCAGCA ATGCGTTCTT GCTGTTGGCT
TTGGTGCCCA TCCTGGCGGC AGTCACTATC CACTTCCTCG GCATCGAAAC CAAGGGGAAA
GTGCTGGAGC AGCTTGAGCT GTAA
|
|---|
| Protein sequence | MKPGVLIDSG IDHDASLGAM SLGKIVARIE RLKSNGMHVR ARLLIGLATF FDGFDVIVIA
ATLPLLIAQW HLTPAQIAFV IGAPGIGQLI GALVFPMFAE RFGRVRMIGY SAGIIGLMSL
LCGVAPSFAV FAALRIVQGI GLGGELPVAA TYINEVTRAH GRGRFVLLYE VVFPIGLLVS
NALGAWLVPH FGWEVMYFLG GIPLVLFFTL PKAVPESPRW LATNGRMAEA DAAQARFEAK
AKGPLPPLGD TSAFEQMSHR HPKRGMRDLF GPVYIKRTVV VAMLWATCGF IQYGLSTWLP
TVYKTIYHAP LQLALNLAAL ASVLGVVGSL VCAMIVDKVG RKPVMVVSFV LCGVSLALAG
LLHEQSLYVV AGLCSLALGL MACGFITAYV YTPELYPTNI RAIGCGMGGA WLKIAAIFSP
MLIGSTIGSG NISNAFLLLA LVPILAAVTI HFLGIETKGK VLEQLEL
|
|---|
| |