| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4428 |
|---|
| Symbol | |
|---|
| ID | 6286047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 736497 |
|---|
| End bp | 737288 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642618908 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_001892949 |
|---|
| Protein GI | 187926604 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGC GCACGATAGA GTCCCCTTCA CCCGTCGAAA CCCGCCAACT TCCCCAGCTC
AGGCTCGTCC GCGACGCAAC GCAGATCCGC CAGACAACAC CCCTGATTCC CAGCAGCCAA
TGCACCAACT GCATGATGCA CTGGGCCTGT ATCGCGAGCG CTGTGCCATC GGCGCAACAC
GAACAACTGG ATCGGATGGT GCACACCTGG CGCAAGATCG CCAAAGGCGA AGCCCTTTTT
CGGGCGGGCG ACGTGTTCCA TGCGCTGTAT GCCATCCGGT CCGGTTCGTT CAAAACCGTG
GTATCGCACC CCAACGGCGC AAATCACGTC ACCGGATTCC AATTGGCGGG CGAAACGCTC
GGCCTCGACG GCATTGCCGC CGATCGGCAC ACATGCGACG CGATTGCGCT GGAGGACAGC
ACCGTGTGCT CCATGCCCTT CCATTGCATT GAGGACCTGT GCCAGGACAT TCGTCCACTG
CAACATCGCC TTCACCAATT GATGGCAGAA GAGATCGTGC GCGAGTCAGG GCTGATGCTG
CTGCTCGCTG GGCTGAGTGC GGAAGCGCGT GTTGCCACCT TCCTGCTGAA CCTTTCCACG
CGCATGCAGG ACCGGGGGTA TTCCGCTACC AGCTTCACGC TGCGCATGAC CCGGGAAGAA
ATCGGCAGCT ACCTTGGCAT GCAGCTCGAG ACCGTCAGCC GTGCGCTGTC GAGGTTTCAG
CGCGAAGGCT GGATCGTGGT GAGCGGCAAG AACATCGAGC TGACCGACAA GGCGGCACTG
ATGGAGCTTT GA
|
|---|
| Protein sequence | MIPRTIESPS PVETRQLPQL RLVRDATQIR QTTPLIPSSQ CTNCMMHWAC IASAVPSAQH
EQLDRMVHTW RKIAKGEALF RAGDVFHALY AIRSGSFKTV VSHPNGANHV TGFQLAGETL
GLDGIAADRH TCDAIALEDS TVCSMPFHCI EDLCQDIRPL QHRLHQLMAE EIVRESGLML
LLAGLSAEAR VATFLLNLST RMQDRGYSAT SFTLRMTREE IGSYLGMQLE TVSRALSRFQ
REGWIVVSGK NIELTDKAAL MEL
|
|---|
| |