Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4301 |
Symbol | |
ID | 6285840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 597896 |
End bp | 599086 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618783 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001892824 |
Protein GI | 187926479 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.555384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTC GCCCTCTGAG CTTTGCCCTG CTACTGCCGT TGTTACTGTC GGCACAGCCG GTTGCGACCG ACAGCTACCT CCCCGCCCTG CCAGCCATTG CCCAGGCGCT GGGATCGGCC AGCACGAGCC TCACGGTCTT CGCGCTGGCC TTTGGCATCG GGCAACTGCC GATGGGCAGC CTGGCCGATC GTTTTGGCCG GCGCCATGTG CTGCTGATCG GGCTCGCGTG CTACGCCCTG GCTGCACTGG CCGGCGCGCT GGCGACAACC GCTTCCATGC TGACCGCTGC GCGCGCGCTG CAGGGCTTCT CGATGGCCGC CATCCTCGTG TGTGCGCGTG CTGCCGTACG CGATCTGCAC CCGGCACGCG ATGGTCCGCA CGTCATGGCA CGCGGCCTCA CGGGGCTGGG CTTCGTGGCG TTGATGGCAC CGATTCTCGG TGCCTTTGTC GCGCAACACG CGGGTTGGCG CTGGGTGCTG GTGGGCATGA GCCTCTATGC AATCGTGCTG TGGGCGATGT GCTGGTATGG CTTTGCCGAA ACCCGGCAAG AGACACACAT CCAGGCAGGC AGCGTGCGCG AGATCTTTGC CAGCGCGGAT TTTCGCGCCT GGGGGCTGCT GGCGGCCACG ACCTACGCCG GCATCTTCTG CTTCCTGCTG CTCTCGCCGA TGGTCTATAT CGCGTACCTC GGCTTATCGC CCGAGCTTTA TGGTTGGATA CCGGCTGGCG GCTCGCTCGT CTATATCGTG AGTACGACCG GCTGCCGGCG CCTGCTGCGC CGCCAGAGCC TCGTGCGGAC GGTGCAGCAA GGCGCCACCC TCAGCCTGGT TGGCGCCGGC ATCCAGGGTT TGGGCTGCTG GCTGCTTCCC GGACAAGCGT GGCCGCTGCT GCTCGGGCAC GGCATCTATT GCATGGGCCA CGGCATTCAC CAGCCCTGCG GCCAGGCAGG CGCGGTGGGC GAGTTGCCGC ACCTTGCGGG GCGCGCGGTG TCATGGTCGG GCTTCATCAT GATGCTGGCG GCCTTCTGCC TGGGGCAGAC CGCAGCAGCC TTTGATGACA CGTCGCACAG CCTCGGCGCC TGGCCCATGG TGGTGCCGAT GATGCTTGCC GGCACCGTGC TGGCGTCCAT CGCCTTCCTT TGGCTGCCGA AGCTGCAGAG CCAGCCGGAT CCACAAAGCG CTGCCGCATA G
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Protein sequence | MTRRPLSFAL LLPLLLSAQP VATDSYLPAL PAIAQALGSA STSLTVFALA FGIGQLPMGS LADRFGRRHV LLIGLACYAL AALAGALATT ASMLTAARAL QGFSMAAILV CARAAVRDLH PARDGPHVMA RGLTGLGFVA LMAPILGAFV AQHAGWRWVL VGMSLYAIVL WAMCWYGFAE TRQETHIQAG SVREIFASAD FRAWGLLAAT TYAGIFCFLL LSPMVYIAYL GLSPELYGWI PAGGSLVYIV STTGCRRLLR RQSLVRTVQQ GATLSLVGAG IQGLGCWLLP GQAWPLLLGH GIYCMGHGIH QPCGQAGAVG ELPHLAGRAV SWSGFIMMLA AFCLGQTAAA FDDTSHSLGA WPMVVPMMLA GTVLASIAFL WLPKLQSQPD PQSAAA
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