Gene Rpic_4226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4226 
Symbol 
ID6285678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp511706 
End bp512797 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content68% 
IMG OID642618709 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_001892750 
Protein GI187926405 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.975895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTT CTCCACCGCG CCTCGTTGTT TCGGATCGCT CGCTGCCCAG CGATGCGGCA 
TCGGCCGCTG TTCGCCCAGC ACAACCGTAC GCAACGCCCG CTCCCACAAA TGTTGCACTG
AATAACAAAT TGCGCGGCGC AGCATCGACG CTGCCTAAGC AAGCTTCTGC GTGCAAGGAA
ACGGCCGGCG CGGCGCCGTT GCCGCGCGAG GTCACGGCCG AAGACTATTG GACGCAGGGC
TACGCGGGCC GTATCCGCCT GCGTGTGTTC CGCCCAGAAA TGCACGCCGA CGATGCCGCC
GCACCGCTGC GCCGCCCTGG CGTGCTGTAC CTGCATGGTG GCGGTTTCGT GCGCGGCTCC
ATTGATGATG CCGATGCGCC GGGACGCTAC CTGGCCGCCA CATTGCCCGC CGTGGTGGTC
ACGGTCGGCT ATTCGCTGGC GCCCGCCGCG CCCTTCCCCG CCGCACCGGA AGACGTGTAC
GCCGCACTGT GCTGCATGGC CGACCATGCC GACGCATGGG GTATCGACCG CCGCCGCATC
GCAGTGGCCG GGCACGACGC CGGCGGCAAC CTGTCGGCCG CGCTGACGAT GATTGCGCGC
GACCGTGGCG GCCCAAACCT CCGTGCGCAG GTCCTGATCG CGCCGATGCT CGATCCGACC
ATGGCTCGCG TGCGCCCCGA CCACCTGGCC AACGCAGACA ACTCGGCTGA AGTCTGTGCC
GATTGCTATC GCCAGTACCT GCCCCGCCCG ACCGAGCGCG TGCATCCCTA CGCCGCGCCG
GTGGAATCGC GCCGCCTGCA GGGCCTGCCC CCCGCCCTGC TGCTCACTGC GCCGCAAGAC
CTGCTGCGCA CCGAAGCAGA ACGCTATGCC GCGTGCCTTA TTGAAGCTGG CGTGGTCACG
CAGGTCGTGC GCGTGAACGA GGCCTGCCAT GACTCGATCG CCATGAGCGC CGTGGCGCAA
GACGAGATGA CGTGCTTCCT GCGCTGGCAC CTTGGCATGA CGCGCCAGAC GGCGGCACCA
CGCAAACGCC GTCCACGTGC GGATCGGAAG GACCGCACTT CCATTGACCC GACCGGGGAG
ACGCCTGGCT GA
 
Protein sequence
MGSSPPRLVV SDRSLPSDAA SAAVRPAQPY ATPAPTNVAL NNKLRGAAST LPKQASACKE 
TAGAAPLPRE VTAEDYWTQG YAGRIRLRVF RPEMHADDAA APLRRPGVLY LHGGGFVRGS
IDDADAPGRY LAATLPAVVV TVGYSLAPAA PFPAAPEDVY AALCCMADHA DAWGIDRRRI
AVAGHDAGGN LSAALTMIAR DRGGPNLRAQ VLIAPMLDPT MARVRPDHLA NADNSAEVCA
DCYRQYLPRP TERVHPYAAP VESRRLQGLP PALLLTAPQD LLRTEAERYA ACLIEAGVVT
QVVRVNEACH DSIAMSAVAQ DEMTCFLRWH LGMTRQTAAP RKRRPRADRK DRTSIDPTGE
TPG