Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4196 |
Symbol | |
ID | 6285626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 474191 |
End bp | 475084 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618679 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_001892720 |
Protein GI | 187926375 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGACC CTAAGCCCGA CCCCATGCGT GAACCGATGG ACATCGTGAC CCGACTCTCC CAGCGTGCCG CTGAACTGCG CCCCGCCGAG CAGAAGGTCG CGCAGACCGT CCTGAGCGAC ATCGCGGAGG CCGCCGCCGG CAGCATCCAG ACGCTTGCCG AACGCGCCGG CGTGAGTGAG GCTAGCGTCA CCCGTTTTGC CAAGGCGATG GGCTGCCGTG ACGTGCGCGA ACTCAAGCTC AAGCTAGCGC AGGCAGCCGC AGTCGGCCAG CGCTTTCTGG ATGGCGGCGC GGACCGCCCG CCGTCCAGCG CAGACGGCAT CCTGGCCGAC ATCAGCAACG TGCTGGAAGC CAACCGCGCC CTGGTGCAGC CGGAGGCATT CCGCGCCGCG GCCGTCGCAC TGGTGGCGGC GCGCATGATT GCCGTGTTCG GCATGGGCGG TGGCTCGACC ACCATGGCCG ACGAAATGCG CTACCGGCTG GCCCGCCTGG GACGGCCGGT CACCACCTAT CATGATTCGA TGCTGCAGCG GATGGTCGCG GCCACGCTCA GCCCGGACGA TGTGGTGGTC GTGTTTTCCG TGACCGGCCA CGTGCCGGAG GTCATCGACA GCGTGACCAT CGCGCGCGAG TACGGCGCCA GGATCGTCGC CATCACGGCC ATCGGCTCGC CGCTGGCGGC GCTGGCCGAT GTCTTGCTGC CGATCCAGGC CATGGAAACC GATTTCATCT TCAAGCCGTC GTCATCGCGC TACGCCATGA TGATGATGAT CGACTTGCTG GCCACCGAAG TCGCACTGCA GCAAGCCGAT CGCAGCAAGG AACTGTTACG GCGCATCAAG TACGTGCTCG ATGCGCATCG CGGCGGCGGC AATCGTCAGC CGCTCGGAGA TTGA
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Protein sequence | MRDPKPDPMR EPMDIVTRLS QRAAELRPAE QKVAQTVLSD IAEAAAGSIQ TLAERAGVSE ASVTRFAKAM GCRDVRELKL KLAQAAAVGQ RFLDGGADRP PSSADGILAD ISNVLEANRA LVQPEAFRAA AVALVAARMI AVFGMGGGST TMADEMRYRL ARLGRPVTTY HDSMLQRMVA ATLSPDDVVV VFSVTGHVPE VIDSVTIARE YGARIVAITA IGSPLAALAD VLLPIQAMET DFIFKPSSSR YAMMMMIDLL ATEVALQQAD RSKELLRRIK YVLDAHRGGG NRQPLGD
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