| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4119 |
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| Symbol | |
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| ID | 6285511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 388079 |
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| End bp | 389701 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642618606 |
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| Product | amine oxidase |
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| Protein accession | YP_001892647 |
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| Protein GI | 187926302 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.670379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0166866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC GACGCAGCTT TCTTGTGGGC GCAGCTGCAG CCGGTGTGGC TGCCGCGGGT
GCGGCTTCGT GGGCGGGCTT TCGCGCCTTT ACTGAAATCA CGCCCAGCGT GCGCATGCCC
GGCCAGACTG CCGGCCATCA ACTGCGCGAC CTGCGCGTGC TGCCGGCACC ATCGGAAACG
CGGCGCGTGG GCGTTGCCAT CTGCGGCAGC GGCATTGGCG GATTAAGCTG CGCGTGGCGG
CTGGCAAAAG GCGGCCGGCG CGACGTGGTT GTCGTCGAGG GACCGGAGCG CTATGGCAAT
GCCGCGGGCG GTGCGTTCGG CACGCAGCGC TTCCCCACGG GGGCGCATTA TCTGCCACTG
CCGTCGATGG AATCGACGCA CGTGCGAGAG ATGCTGGCCG ACTTTGGCGT CATCGAGCGC
GACCCGTTTG CCCTGCGCCC GACGTACGAC GAACGCGTGC TCGTTCACGC GCCCGATGAA
CGCCTGTGGC TCGGCAATCG CTGGCAAGAC GGCTTTGTGC CGCACGAAGG CATTACCGAG
GCGGAACGCG CCGAGCACAC CAGGTTCTTC GCCCACATCG ACCGGCTGCG CCAGACCACC
GGTGCCGACG GCCGCCGCGT CTTCGCCGTG CCGACGGCGC TCTCGTCCGC AGACCCAGCT
TGGCGCGCGC TAGACGCACT CACCTTCCGC GACTGGCTGC ACCGCGAGGG CTACCGCGCC
GCCACGCTGC ACTGGTATGC CGATTACTGC TGCCGCGACG ATTACGGCGC CACGGCGGAT
CAGGTTTCCG CCTGGGCCGG CATCGCCTAT TTCGCCAGCC GCGGCGGCAT GGCAAGCAAC
GCCGAGCAAG GCACCGTGCT CACGTGGCCG GAAGGCCTTG ACTGGATGGC CAAGCGGCTG
TTCGAAGCCG CCGGATTGGA CGAACCGGGC CGTTTGCTGC AGGGCAGCGC CGCGCGCATC
GGTACGACGA ACGAGGCCAG CGCACGCGTC TTTGCCGATG TGCTGCAAGC GGATGGCCGC
GTCGTGCGCC TGCTAGCCGA TCACGTGGTC AGCGCGATGC CGCTGCACGT TGCCAAACAC
ATCGTCGACG GCTTTGACGT GCCCGCCGCC GAGTTGCCCG AAACCGCACC GTGGCTGCTC
GCCAACCTGC TCATCGACGG CTTTCCGCCC GAACACGACG ACACGCCGCT GGCGTGGGAC
AACGTGGTCT ATCGCGGCAC GGGCCTGGGA TATGTGGTCG CCAATCACCA GGACATTCGC
GTCGGGCCGC CCGCGCAGAG CGTGTTCACG GCCTACGTGG CGCTGTCGGA CATGACACCG
AAGGCCGCGC GTGAATGGCT GCTGAAGGCA TCGCCGCAAA CGCTGCTCGA TCGTGCGCTG
GCCGATCTCG ATACGGTGTA CGGCATCCGC CTGCGCACGC AGATCCGCCG GGCCGACCTG
ACGCTACGCG GCCATGCGAT GGCGATTCCC ACACCGGGCT TTCTCTCCAG ACCCGGCATT
GCGCGCCTGC GTGAGAGCGC CGGGCCGATC CACTACGCGC ATGCGGACCT GTCCGGCTAT
TCCGTGTTCG AAGAGGCGGC GTGGTGGGGC GATCGGGCGG CCCGGCGCAT TCTGGGCAAC
TGA
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| Protein sequence | MATRRSFLVG AAAAGVAAAG AASWAGFRAF TEITPSVRMP GQTAGHQLRD LRVLPAPSET
RRVGVAICGS GIGGLSCAWR LAKGGRRDVV VVEGPERYGN AAGGAFGTQR FPTGAHYLPL
PSMESTHVRE MLADFGVIER DPFALRPTYD ERVLVHAPDE RLWLGNRWQD GFVPHEGITE
AERAEHTRFF AHIDRLRQTT GADGRRVFAV PTALSSADPA WRALDALTFR DWLHREGYRA
ATLHWYADYC CRDDYGATAD QVSAWAGIAY FASRGGMASN AEQGTVLTWP EGLDWMAKRL
FEAAGLDEPG RLLQGSAARI GTTNEASARV FADVLQADGR VVRLLADHVV SAMPLHVAKH
IVDGFDVPAA ELPETAPWLL ANLLIDGFPP EHDDTPLAWD NVVYRGTGLG YVVANHQDIR
VGPPAQSVFT AYVALSDMTP KAAREWLLKA SPQTLLDRAL ADLDTVYGIR LRTQIRRADL
TLRGHAMAIP TPGFLSRPGI ARLRESAGPI HYAHADLSGY SVFEEAAWWG DRAARRILGN
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