| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4005 |
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| Symbol | |
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| ID | 6285291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 275320 |
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| End bp | 275961 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642618496 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001892537 |
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| Protein GI | 187926192 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.469867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTC TTTCTGTCAC GTCACCTCAT GCCTCGGCAA CCGTGCTGCG CCAATGCTAC
GTAGCGGCGT GCGCGGGCGA TGCCGTGGGC GTGATGAACG TGCTGCGCGA TGCGTGCGGC
GCGGACCATG CAGCGGCCAT GATCCGGTGG CGCGTCGATG GGAGGTGGCA CTGGGCGGCA
TCGCGCGGCG CACGCTCGGC CGACGTGCTG CTGCATGCGG TACGCGGTGA CGGCGTCGAC
GCGTGGCCGA TGGCCGATGC GGAAGTGCGC GGGGCGGTGT GGCTCGATTA CCGCAAGGCG
GGCGTGCCGC AACCCATGCA GCATGGTGCG GCGCCACAAG CGTTGCTGCC GCACTTTGCG
CAAGCACTGC CGTTGTGCTG GCGACGCGTT GCGGCGCGCG CGGGCATTTC GCCTGCGCAG
CCGGCCAGCC TCTGGCTGAC CGACGCATTC CACCTGACGC GCCGCGAAGC CGATGTTGCC
GATCTGCTCG CAAGCGGCTC CGACCCAGCC TGCATTGCCC GCACGCTAGG CATTTCACTC
GACACGGTGC GCACGCACCT CAAACACGTC TACCGCAAGA CCAACACGCA CAGCCAGTGC
GACGTGGTGC GGCTGATGCT GGCGCTGTCT GCGCGCCGGT AG
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| Protein sequence | MPRLSVTSPH ASATVLRQCY VAACAGDAVG VMNVLRDACG ADHAAAMIRW RVDGRWHWAA
SRGARSADVL LHAVRGDGVD AWPMADAEVR GAVWLDYRKA GVPQPMQHGA APQALLPHFA
QALPLCWRRV AARAGISPAQ PASLWLTDAF HLTRREADVA DLLASGSDPA CIARTLGISL
DTVRTHLKHV YRKTNTHSQC DVVRLMLALS ARR
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