| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3641 |
|---|
| Symbol | |
|---|
| ID | 6288026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3811068 |
|---|
| End bp | 3812228 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642627225 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001901192 |
|---|
| Protein GI | 187930705 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC GTCGGTTCAC ACTCGCGGGG CGCAGCCTCG TACCCATCGT GCAGGGCGGG
ATGGGCGTGG GTATTTCGGC GCACCGGCTG GCCGGCGCCG TGGCGCGCGA AGGCGGCGTC
GGCACCATCG CCAGCATCGA CTTGCGGCAT CACCACGCAG ATCTCGTCGC CGCAACCGAG
AAATCGCGCG ACAAGGACGC CATCAACGCC GCCAACCTCG TTGCGCTGGA CCGCGAGATT
CGCGCCGCGC GTGAAGGCAG CCAAGGCAAC GGCATGATCG CCGTGAACGT GATGAAGGCG
GTGGAATCGC ATCCTGCGCT GGTGCGCCAG GCGTGCGAGA GCGGCGCCGA TGCGATCGTC
ATGGGCGCGG GCCTGCCGCT CGACCTGCCG GAGATGACGG CCGAGCATCC GAAGGTGGCG
CTCATCCCGA TTCTTTCCGA CTCGCGCGGC GTAGGCGTCG TGCTCAAACG GTGGATGAAG
AAGGCGCGGC TGCCCGACGC GGTGGTGATC GAGCATCCGA CACATGCGGG CGGCCACCTG
GGCGCAGCTC GCATCGAAGA TCTGCGAGAC GAGCGGTTCT CGTTTGCGCG CGTGCTGGAT
GAATGCCGTG AATTGTTCAT CAAGCTGGGA CTGGCGGCGG AGCAGATTCC GATCATCCTC
GCGGGCGGCA TCGATTCGCA TGCCAAGGTG AAGCACTGGC TCGACAAGGG CGCCGCTGCG
GTGCAGCTCG GCACTGCATT TGCCGTGACG GAGGAGGGCG ATGCGCACGT GCGCTTCAAG
CGGGTGCTGA CGGGCGCGGA GCAAGGGGAT ATCGGCGAGT TTGTCAGCGT GGCTGGGTTG
CCGGCGCGGG CAGTGATGAC GCCGTGGTTG TCGCGGTATC TCTCACGCGA AAGCGCGCTG
CAGGCCAAGG CCAAGGTGCG GGATTGTCTG CAGGGGTTCG ATTGTTTGCA GACCTGCGGG
CTGCGGGATG GGATTGGCAA GGTCGGGCAG TTCTGCATTG ACCTGAAGCT TGCGCAGGCG
CTGCGTGGGG ATGTGGAGCG CGGATTGTTT TTCCGCGGTG CGGGCAAGCT CCCATTTGGG
CAGGCGATTC GGCCGGTGCG GGAACTGATG CATTACTTGC TGACTGGGGA AAAGCCGGCG
GTATCCTCGA CTTCACCCTG A
|
|---|
| Protein sequence | MLERRFTLAG RSLVPIVQGG MGVGISAHRL AGAVAREGGV GTIASIDLRH HHADLVAATE
KSRDKDAINA ANLVALDREI RAAREGSQGN GMIAVNVMKA VESHPALVRQ ACESGADAIV
MGAGLPLDLP EMTAEHPKVA LIPILSDSRG VGVVLKRWMK KARLPDAVVI EHPTHAGGHL
GAARIEDLRD ERFSFARVLD ECRELFIKLG LAAEQIPIIL AGGIDSHAKV KHWLDKGAAA
VQLGTAFAVT EEGDAHVRFK RVLTGAEQGD IGEFVSVAGL PARAVMTPWL SRYLSRESAL
QAKAKVRDCL QGFDCLQTCG LRDGIGKVGQ FCIDLKLAQA LRGDVERGLF FRGAGKLPFG
QAIRPVRELM HYLLTGEKPA VSSTSP
|
|---|
| |