Gene Rpic_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3420 
Symbol 
ID6289732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3586197 
End bp3586805 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID642627005 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001900973 
Protein GI187930486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CCGACGGCCG CCGCCAGCGT GGCGAACGCG CGCGCGCCCA GGTGTTGGAG 
CACGCCACCG CCATCGCTTC CACCGATGGG CTGGAGGGCC TCACCATCGG CCGCTTGGCC
ACGGATGCAG GCGTGGGCAA GGGCAATATC CAGGTGCTCT TCGGCGACAA GGAAACGCTG
CAGCTCTCCA CGCTCGACGC GGGCGTGGTG CACTACCGCG AGAAGGTGGT GAAGCCCGCG
CTGGCGCTGG AAAGCCCGCT TGCCCGCCTG CGGGCGCTGA CCGACGGCTG GTTCGACTAC
GTGGCCAGCG GCGCATCGCC AGGCGGCTGC TTTGTCTGCG CGGCCAGCTA CGAATACCGG
GCCCGCCCGG GCGCGATCCA GGATCGTGTG CGCGGACACC GCGAGTCGGT GCGTGCGCGG
TTTCGCGAGA CGATTGCCGC GGCGCAGGCG GCCGGTGAAT TGCGCGCGGA TGTCGACGTC
GATCAGCTCG TCTTTGAGAT CGAATCGTTT CGCTCCAACG CCAACGTGGC GTTTCTGATG
GGCGACATGG CGGTGTTCGA GCGCGCGCGC CGCAGCACGC AGGCGCGCAT CGACGCGGCG
CTGGCCTGA
 
Protein sequence
MNKTDGRRQR GERARAQVLE HATAIASTDG LEGLTIGRLA TDAGVGKGNI QVLFGDKETL 
QLSTLDAGVV HYREKVVKPA LALESPLARL RALTDGWFDY VASGASPGGC FVCAASYEYR
ARPGAIQDRV RGHRESVRAR FRETIAAAQA AGELRADVDV DQLVFEIESF RSNANVAFLM
GDMAVFERAR RSTQARIDAA LA